Conservation of cofitness between PP_3600 and PP_4758 in Pseudomonas putida KT2440

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_3600 glucarate transporter 1.0 PP_4758 Major facilitator family transporter 0.14 19
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_5043 D-galactarate permease 0.74 PfGW456L13_2481 Major facilitator family transporter low > 87
Pseudomonas fluorescens SBW25 0.82 PFLU_RS04245 MFS transporter 0.74 PFLU_RS20925 MFS transporter low > 109
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_3297 D-galactarate permease 0.73 Pf6N2E2_2115 Major facilitator family transporter 0.26 52
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_07175 glucarate transporter 0.73 AO356_01235 MFS transporter low > 104
Pseudomonas sp. RS175 0.82 PFR28_00144 putative glucarate transporter 0.72 PFR28_01321 Putative tartrate transporter low > 88
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS04245 MFS transporter 0.74 PFLU_RS20925 MFS transporter low > 109
Pseudomonas simiae WCS417 0.82 PS417_04205 D-galacturonate transporter (MFS superfamily) (from data) 0.75 PS417_18890 MFS transporter low > 88
Pseudomonas fluorescens FW300-N2E3 0.82 AO353_05295 glucarate transporter 0.75 AO353_29035 MFS transporter low > 101
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_1108 D-galactarate permease 0.72 Pf1N1B4_70 Major facilitator family transporter low > 87
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_4226 D-galactonate transporter 0.70 Psyr_3119 Major facilitator superfamily low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_4226 D-galactonate transporter 0.70 Psyr_3119 Major facilitator superfamily low > 86
Herbaspirillum seropedicae SmR1 0.69 HSERO_RS15805 glucarate transporter 0.63 HSERO_RS05735 MFS transporter low > 78
Escherichia coli Nissle 1917 0.68 ECOLIN_RS15540 galactarate/glucarate/glycerate transporter GudP 0.29 ECOLIN_RS13090 MFS transporter low > 55
Escherichia coli BL21 0.68 ECD_02634 putative D-glucarate transporter 0.29 ECD_02172 putative L-rhamnonate transporter low > 61
Escherichia fergusonii Becca 0.68 EFB2_01128 putative glucarate transporter 0.29 EFB2_01610 Inner membrane transport protein RhmT low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_00942 putative glucarate transporter 0.29 OHPLBJKB_01465 Inner membrane transport protein RhmT low > 73
Escherichia coli ECOR38 0.68 HEPCGN_19475 gudP galactarate/glucarate/glycerate transporter GudP 0.29 HEPCGN_22275 MFS transporter low > 87
Escherichia coli BW25113 0.68 b2789 gudP predicted D-glucarate transporter (NCBI) 0.29 b2246 b2246 putative transport protein (VIMSS) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF4843 D-glucarate permease 0.29 GFF1851 L-rhamnonate transporter (predicted by genome context) low > 78
Escherichia coli ECRC98 0.68 JDDGAC_23885 gudP galactarate/glucarate/glycerate transporter GudP 0.29 JDDGAC_26995 MFS transporter low > 86
Escherichia coli ECRC102 0.68 NIAGMN_17990 gudP galactarate/glucarate/glycerate transporter GudP 0.29 NIAGMN_20800 MFS transporter — —
Pectobacterium carotovorum WPP14 0.67 HER17_RS04075 MFS transporter 0.44 HER17_RS16950 MFS transporter low > 75
Rahnella sp. WP5 0.67 EX31_RS03160 MFS transporter 0.46 EX31_RS20665 MFS transporter low > 89
Pantoea sp. MT58 0.65 IAI47_04080 MFS transporter 0.45 IAI47_10485 MFS transporter low > 76
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS24150 glucarate transporter 0.67 BPHYT_RS31140 MFS transporter low > 109
Paraburkholderia graminis OAS925 0.64 ABIE53_006507 ACS family glucarate transporter-like MFS transporter 0.64 ABIE53_004433 MFS family permease low > 113
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_05318 MFS transporter, ACS family, glucarate transporter 0.65 H281DRAFT_03814 Sugar phosphate permease low > 103

Not shown: 23 genomes with orthologs for PP_3600 only; 2 genomes with orthologs for PP_4758 only