Conservation of cofitness between PP_2928 and PP_4722 in Pseudomonas putida KT2440

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2928 Saccharopine dehydrogenase 1.0 PP_4722 Transcription elongation factor GreA 0.30 13
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_5136 Carboxynorspermidine dehydrogenase 0.80 Pf1N1B4_1171 Transcription elongation factor GreA — —
Pseudomonas simiae WCS417 0.95 PS417_15470 saccharopine dehydrogenase 0.79 PS417_24035 transcription elongation factor GreA — —
Pseudomonas fluorescens SBW25 0.95 PFLU_RS17455 saccharopine dehydrogenase family protein 0.80 PFLU_RS25875 transcription elongation factor GreA low > 109
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS17455 saccharopine dehydrogenase family protein 0.80 PFLU_RS25875 transcription elongation factor GreA low > 109
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_1605 Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-) 0.89 Pf6N2E2_3363 Transcription elongation factor GreA — —
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_23425 saccharopine dehydrogenase 0.87 AO356_07475 transcription elongation factor GreA — —
Pseudomonas sp. RS175 0.92 PFR28_01528 Carboxynorspermidine synthase 0.85 PFR28_00078 Transcription elongation factor GreA — —
Pseudomonas stutzeri RCH2 0.89 Psest_1055 Saccharopine dehydrogenase and related proteins 0.77 Psest_0969 transcription elongation factor GreA low > 67
Sinorhizobium meliloti 1021 0.77 SM_b21630 hypothetical protein 0.45 SMc01218 transcription elongation factor GreA — —
Agrobacterium fabrum C58 0.75 Atu4170 hypothetical protein 0.45 Atu2182 transcription elongation facto — —
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_08165 carboxynorspermidine synthase 0.53 CSW01_03330 transcription elongation factor GreA low > 62
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_0331 carboxynorspermidine dehydrogenase 0.39 Ga0059261_0008 transcription elongation factor GreA — —
Brevundimonas sp. GW460-12-10-14-LB2 0.36 A4249_RS14845 saccharopine dehydrogenase family protein 0.48 A4249_RS00695 transcription elongation factor GreA — —
Alteromonas macleodii MIT1002 0.36 MIT1002_03109 Saccharopine dehydrogenase 0.60 MIT1002_01468 Transcript cleavage factor GreA low > 70
Bacteroides thetaiotaomicron VPI-5482 0.36 BT4612 conserved hypothetical protein (NCBI ptt file) 0.34 BT2565 transcription elongation factor greA (NCBI ptt file) — —
Bacteroides stercoris CC31F 0.35 HMPREF1181_RS11900 saccharopine dehydrogenase family protein 0.33 HMPREF1181_RS00805 transcription elongation factor GreA — —
Bacteroides ovatus ATCC 8483 0.35 BACOVA_05404 saccharopine dehydrogenase 0.34 BACOVA_01643 prokaryotic transcription elongation factor, GreA/GreB domain protein low > 94
Desulfovibrio vulgaris Miyazaki F 0.35 DvMF_1535 Saccharopine dehydrogenase (RefSeq) 0.42 DvMF_0383 greA transcription elongation factor GreA (RefSeq) low > 51
Phocaeicola vulgatus CL09T03C04 0.35 HMPREF1058_RS15975 saccharopine dehydrogenase family protein 0.34 HMPREF1058_RS12565 transcription elongation factor GreA — —
Phocaeicola dorei CL03T12C01 0.35 ABI39_RS11940 saccharopine dehydrogenase family protein 0.34 ABI39_RS04145 transcription elongation factor GreA low > 72
Desulfovibrio vulgaris Hildenborough JW710 0.35 DVU0418 lys1 saccharopine dehydrogenase (TIGR) 0.45 DVU3245 greA transcription elongation factor GreA (TIGR) low > 55
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS00110 saccharopine dehydrogenase family protein 0.36 HMPREF1078_RS17725 transcription elongation factor GreA low > 61

Not shown: 0 genomes with orthologs for PP_2928 only; 74 genomes with orthologs for PP_4722 only