Conservation of cofitness between PP_1155 and PP_4675 in Pseudomonas putida KT2440

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1155 YaiC/YhcK/ArdA family protein 1.0 PP_4675 methionine sulfoxide reductase heme-binding subunit 0.17 12
Pseudomonas simiae WCS417 0.64 PS417_21835 histidine kinase 0.71 PS417_23785 sulfite oxidase low > 88
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS23435 diguanylate cyclase 0.64 PFLU_RS25625 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 109
Pseudomonas fluorescens SBW25 0.62 PFLU_RS23435 diguanylate cyclase 0.64 PFLU_RS25625 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 109
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_21315 histidine kinase 0.64 AO353_14520 sulfite oxidase low > 101
Pseudomonas sp. S08-1 0.54 OH686_04700 hypothetical protein 0.55 OH686_08100 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 80
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_01080 histidine kinase 0.66 AO356_16195 sulfite oxidase low > 104
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_139 Two-component response regulator 0.64 Pf6N2E2_5180 FIG001196: Membrane protein YedZ low > 103
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_5860 Two-component response regulator 0.71 Pf1N1B4_2883 FIG001196: Membrane protein YedZ low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_3763 GGDEF domain protein 0.69 Psyr_0851 Protein of unknown function UPF0191 low > 86
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_3763 GGDEF domain protein 0.69 Psyr_0851 Protein of unknown function UPF0191 low > 86
Serratia liquefaciens MT49 0.44 IAI46_05890 diguanylate cyclase 0.25 IAI46_22740 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 86
Dickeya dadantii 3937 0.43 DDA3937_RS06830 diguanylate cyclase 0.26 DDA3937_RS01410 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 74
Pseudomonas stutzeri RCH2 0.42 Psest_1455 diguanylate cyclase (GGDEF) domain 0.56 Psest_1041 Predicted membrane protein low > 67
Pectobacterium carotovorum WPP14 0.38 HER17_RS14460 diguanylate cyclase AdrA 0.21 HER17_RS20190 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF4282 Protein YaiC 0.26 GFF2130 FIG001196: Membrane protein YedZ low > 78
Escherichia coli ECOR27 0.37 NOLOHH_01540 adrA diguanylate cyclase AdrA 0.26 NOLOHH_16180 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_03289 putative diguanylate cyclase DgcC 0.26 OHPLBJKB_01757 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 73
Escherichia coli BW25113 0.37 b0385 yaiC predicted diguanylate cyclase (NCBI) 0.26 b1972 yedZ hypothetical protein (NCBI) low > 76
Escherichia coli BL21 0.37 ECD_00332 diguanylate cyclase, cellulose regualtor 0.26 ECD_01887 inner membrane heme subunit for periplasmic YedYZ reductase low > 61
Escherichia coli ECRC62 0.37 BNILDI_22955 adrA diguanylate cyclase AdrA 0.26 BNILDI_14970 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 75
Escherichia coli ECRC101 0.37 MCAODC_27840 adrA diguanylate cyclase AdrA 0.26 MCAODC_19845 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 87
Escherichia coli ECOR38 0.37 HEPCGN_07255 adrA diguanylate cyclase AdrA 0.23 HEPCGN_03910 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 87
Escherichia coli Nissle 1917 0.37 ECOLIN_RS02340 diguanylate cyclase AdrA 0.23 ECOLIN_RS11205 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ — —
Escherichia coli ECRC102 0.37 NIAGMN_06670 adrA diguanylate cyclase AdrA 0.26 NIAGMN_02505 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ — —
Escherichia coli ECRC100 0.37 OKFHMN_08615 adrA diguanylate cyclase AdrA 0.25 OKFHMN_25550 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 80
Escherichia coli ECRC99 0.37 KEDOAH_19350 adrA diguanylate cyclase AdrA 0.26 KEDOAH_02545 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ — —
Escherichia coli ECRC98 0.37 JDDGAC_12270 adrA diguanylate cyclase AdrA 0.26 JDDGAC_00135 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 86
Escherichia fergusonii Becca 0.37 EFB2_03671 putative diguanylate cyclase DgcC 0.23 EFB2_01978 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 86
Enterobacter sp. TBS_079 0.35 MPMX20_00975 putative diguanylate cyclase DgcC 0.27 MPMX20_04161 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 85
Enterobacter asburiae PDN3 0.33 EX28DRAFT_2586 diguanylate cyclase (GGDEF) domain 0.28 EX28DRAFT_3305 Predicted membrane protein low > 76
Acidovorax sp. GW101-3H11 0.29 Ac3H11_3069 Response regulator containing a CheY-like receiver domain and a GGDEF domain 0.26 Ac3H11_2977 FIG001196: Membrane protein YedZ low > 79
Pantoea sp. MT58 0.27 IAI47_19665 diguanylate cyclase 0.19 IAI47_02420 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 76
Rahnella sp. WP5 0.24 EX31_RS22990 diguanylate cyclase 0.26 EX31_RS12220 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 89
Klebsiella michiganensis M5al 0.24 BWI76_RS21800 MASE2 domain/diguanylate cyclase 0.26 BWI76_RS25520 sulfoxide reductase heme-binding subunit YedZ low > 92

Not shown: 4 genomes with orthologs for PP_1155 only; 19 genomes with orthologs for PP_4675 only