Conservation of cofitness between PP_1070 and PP_4606 in Pseudomonas putida KT2440

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1070 glutamate / aspartate ABC transporter - permease subunit 1.0 PP_4606 putative Outer membrane ferric siderophore receptor 0.15 14
Pseudomonas fluorescens SBW25 0.95 PFLU_RS05640 amino acid ABC transporter permease 0.65 PFLU_RS05070 TonB-dependent receptor low > 109
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS05640 amino acid ABC transporter permease 0.65 PFLU_RS05070 TonB-dependent receptor low > 109
Pseudomonas simiae WCS417 0.94 PS417_05555 amino acid ABC transporter permease 0.64 PS417_05000 TonB-dependent receptor low > 88
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_18225 amino acid ABC transporter permease 0.32 AO356_25695 ligand-gated channel low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.93 Psyr_3909 L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein 0.32 Psyr_3345 TonB-dependent siderophore receptor low > 86
Pseudomonas syringae pv. syringae B728a 0.93 Psyr_3909 L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein 0.32 Psyr_3345 TonB-dependent siderophore receptor low > 86
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_5569 Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4) 0.32 Pf6N2E2_1291 Ferrichrome-iron receptor low > 103
Pseudomonas sp. RS175 0.90 PFR28_03372 Glutamate/aspartate import permease protein GltJ 0.33 PFR28_01623 Metal-pseudopaline receptor CntO low > 88
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_16285 ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, permease component 2 (from data) 0.68 AO353_04880 TonB-dependent receptor low > 101
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_4771 ABC transporter for L-Asparagine and possibly other L-amino acids, permease component 1 (from data) 0.69 PfGW456L13_4949 Ferrichrome-iron receptor low > 87
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_772 ABC transporter for L-asparagine and L-glutamate, permease component 1 (from data) 0.32 Pf1N1B4_5080 Ferrichrome-iron receptor low > 87
Dickeya dianthicola 67-19 0.59 HGI48_RS06265 amino acid ABC transporter permease 0.41 HGI48_RS06025 TonB-dependent siderophore receptor low > 71
Dickeya dianthicola ME23 0.59 DZA65_RS06610 amino acid ABC transporter permease 0.41 DZA65_RS06370 TonB-dependent siderophore receptor low > 75
Pectobacterium carotovorum WPP14 0.59 HER17_RS15195 amino acid ABC transporter permease 0.40 HER17_RS15480 TonB-dependent siderophore receptor low > 75
Rahnella sp. WP5 0.59 EX31_RS23170 amino acid ABC transporter permease 0.26 EX31_RS01210 TonB-dependent siderophore receptor low > 89
Dickeya dadantii 3937 0.58 DDA3937_RS06220 amino acid ABC transporter permease 0.42 DDA3937_RS05980 TonB-dependent receptor low > 74
Escherichia coli ECRC100 0.58 OKFHMN_07260 gltJ glutamate/aspartate ABC transporter permease GltJ 0.36 OKFHMN_18835 fhuE TonB-dependent siderophore receptor low > 80
Escherichia coli ECRC101 0.58 MCAODC_26475 gltJ glutamate/aspartate ABC transporter permease GltJ 0.36 MCAODC_09350 fhuE TonB-dependent siderophore receptor low > 87
Escherichia coli ECRC98 0.58 JDDGAC_10905 gltJ glutamate/aspartate ABC transporter permease GltJ 0.36 JDDGAC_22470 fhuE TonB-dependent siderophore receptor low > 86
Escherichia coli ECRC102 0.58 NIAGMN_05315 gltJ glutamate/aspartate ABC transporter permease GltJ 0.36 NIAGMN_16600 fhuE TonB-dependent siderophore receptor
Klebsiella michiganensis M5al 0.58 BWI76_RS08105 glutamate/aspartate ABC transporter permease GltJ 0.35 BWI76_RS16835 TonB-dependent siderophore receptor low > 92
Escherichia coli ECRC99 0.58 KEDOAH_20710 gltJ glutamate/aspartate ABC transporter permease GltJ 0.36 KEDOAH_09310 fhuE TonB-dependent siderophore receptor
Enterobacter sp. TBS_079 0.58 MPMX20_01305 Glutamate/aspartate import permease protein GltJ 0.34 MPMX20_03876 Metal-pseudopaline receptor CntO low > 85
Enterobacter asburiae PDN3 0.58 EX28DRAFT_2317 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 0.34 EX28DRAFT_3067 TonB-dependent siderophore receptor low > 76
Serratia liquefaciens MT49 0.58 IAI46_05990 amino acid ABC transporter permease 0.41 IAI46_04645 TonB-dependent siderophore receptor low > 86
Escherichia fergusonii Becca 0.58 EFB2_03445 Glutamate/aspartate import permease protein GltJ 0.36 EFB2_00779 Metal-pseudopaline receptor CntO low > 86
Escherichia coli Nissle 1917 0.57 ECOLIN_RS03520 glutamate/aspartate ABC transporter permease GltJ 0.36 ECOLIN_RS17485 TonB-dependent siderophore receptor low > 55
Pantoea sp. MT58 0.57 IAI47_13975 amino acid ABC transporter permease 0.27 IAI47_19415 TonB-dependent siderophore receptor low > 76
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_04269 L-glutamate ABC transporter membrane protein /L-aspartate ABC transporter membrane protein 0.30 H281DRAFT_04921 iron complex outermembrane recepter protein low > 103
Paraburkholderia graminis OAS925 0.56 ABIE53_003509 glutamate/aspartate transport system permease protein 0.30 ABIE53_001697 iron complex outermembrane receptor protein low > 113
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS26880 amino acid ABC transporter permease 0.54 QEN71_RS15145 TonB-dependent receptor low > 153
Variovorax sp. SCN45 0.52 GFF4089 Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) 0.53 GFF5286 Ferrichrome-iron receptor low > 127

Not shown: 26 genomes with orthologs for PP_1070 only; 1 genomes with orthologs for PP_4606 only