Conservation of cofitness between PP_1906 and PP_4343 in Pseudomonas putida KT2440

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1906 ribosomal large subunit pseudouridine synthase C 1.0 PP_4343 Flagellar biosynthesis protein FlhF 0.36 4
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_1639 ribosomal large subunit pseudouridine synthase C 0.83 Psyr_3439 GTP-binding signal recognition particle SRP54, G-domain protein low > 86
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_1639 ribosomal large subunit pseudouridine synthase C 0.83 Psyr_3439 GTP-binding signal recognition particle SRP54, G-domain protein low > 86
Pseudomonas sp. RS175 0.90 PFR28_03018 Ribosomal large subunit pseudouridine synthase C 0.82 PFR28_00850 Signal recognition particle 54 kDa protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_5944 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.82 Pf6N2E2_2575 Flagellar biosynthesis protein FlhF 0.33 88
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_20125 23S rRNA pseudouridylate synthase 0.82 AO356_03740 flagellar biosynthesis protein FlhF low > 104
Pseudomonas simiae WCS417 0.88 PS417_21480 23S rRNA pseudouridylate synthase 0.84 PS417_19705 flagellar biosynthesis regulator FlhF 0.33 44
Pseudomonas fluorescens SBW25 0.88 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.84 PFLU_RS21670 flagellar biosynthesis protein FlhF low > 109
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.84 PFLU_RS21670 flagellar biosynthesis protein FlhF low > 109
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_01405 23S rRNA pseudouridylate synthase 0.85 AO353_18775 flagellar biosynthesis protein FlhF low > 101
Pseudomonas stutzeri RCH2 0.87 Psest_1680 pseudouridine synthase, RluA family 0.65 Psest_1738 flagellar biosynthetic protein FlhF — —
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_2097 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.84 PfGW456L13_4333 Flagellar biosynthesis protein FlhF low > 87
Pseudomonas sp. S08-1 0.86 OH686_22095 LSU rRNA pseudouridine(955/2504/2580) synthase 0.71 OH686_02740 flagellar biosynthesis protein FlhF low > 80
Alteromonas macleodii MIT1002 0.56 MIT1002_01725 Ribosomal large subunit pseudouridine synthase C 0.24 MIT1002_01101 Flagella-associated GTP-binding protein low > 70
Shewanella loihica PV-4 0.55 Shew_1594 RluA family pseudouridine synthase (RefSeq) 0.25 Shew_1381 flhF flagellar biosynthesis regulator FlhF (RefSeq) — —
Shewanella amazonensis SB2B 0.55 Sama_1988 pseudouridylate synthase (RefSeq) 0.26 Sama_2282 flhF flagellar biosynthesis regulator FlhF (RefSeq) low > 62
Shewanella sp. ANA-3 0.53 Shewana3_2566 ribosomal large subunit pseudouridine synthase C (RefSeq) 0.26 Shewana3_1357 flhF flagellar biosynthesis regulator FlhF (RefSeq) low > 73
Marinobacter adhaerens HP15 0.51 HP15_2221 pseudouridine synthase, RluA family 0.29 HP15_2304 flagellar biosynthesis regulator FlhF low > 73
Rhodanobacter denitrificans MT42 0.46 LRK55_RS17750 RluA family pseudouridine synthase 0.28 LRK55_RS13310 flagellar biosynthesis protein FlhF low > 63
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS17895 RluA family pseudouridine synthase 0.28 LRK54_RS13570 flagellar biosynthesis protein FlhF low > 59
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_07405 rluA 23S rRNA pseudouridine(955/2504/2580) synthase 0.27 OKGIIK_02820 flhF flagellar biosynthesis protein FlhF low > 52
Dechlorosoma suillum PS 0.44 Dsui_2437 pseudouridine synthase, RluA family 0.24 Dsui_1724 flagellar biosynthetic protein FlhF low > 51

Not shown: 63 genomes with orthologs for PP_1906 only; 1 genomes with orthologs for PP_4343 only