Conservation of cofitness between PP_2214 and PP_4143 in Pseudomonas putida KT2440

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2214 3-hydroxyacyl-CoA dehydrogenase type-2 1.0 PP_4143 conserved protein of unknown function 0.27 20
Pseudomonas fluorescens SBW25 0.80 PFLU_RS14760 SDR family NAD(P)-dependent oxidoreductase 0.79 PFLU_RS12915 methyltransferase domain-containing protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS14760 SDR family NAD(P)-dependent oxidoreductase 0.79 PFLU_RS12915 methyltransferase domain-containing protein low > 109
Pseudomonas sp. RS175 0.76 PFR28_01881 putative oxidoreductase 0.80 PFR28_01553 hypothetical protein low > 88
Pseudomonas simiae WCS417 0.75 PS417_13860 3-hydroxy-2-methylbutyryl-CoA dehydrogenase 0.80 PS417_12225 SAM-dependent methyltransferase — —
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_2981 Probable acyl-CoA dehydrogenase (EC 1.3.99.3) 0.81 PfGW456L13_3339 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) low > 87
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_1144 Probable acyl-CoA dehydrogenase (EC 1.3.99.3) 0.80 Pf6N2E2_588 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) — —
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_25690 3-hydroxy-2-methylbutyryl-CoA dehydrogenase 0.81 AO353_23495 SAM-dependent methyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_26345 3-hydroxy-2-methylbutyryl-CoA dehydrogenase 0.80 AO356_24485 SAM-dependent methyltransferase low > 104
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_4785 Probable acyl-CoA dehydrogenase (EC 1.3.99.3) 0.81 Pf1N1B4_4597 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) — —
Pseudomonas stutzeri RCH2 0.68 Psest_2447 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 0.63 Psest_2072 Methyltransferase domain. low > 67
Pseudomonas sp. S08-1 0.67 OH686_00865 3-hydroxyacyl-CoA dehydrogenase or 17hydroxysteroid dehydrogenase type 10 (HSD10)-like 0.64 OH686_03575 SAM-dependent methyltransferase low > 80
Dechlorosoma suillum PS 0.66 Dsui_1624 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein 0.21 Dsui_2483 methylase involved in ubiquinone/menaquinone biosynthesis — —
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS00745 3-hydroxyacyl-CoA dehydrogenase 0.20 ABZR87_RS14170 class I SAM-dependent methyltransferase — —
Herbaspirillum seropedicae SmR1 0.61 HSERO_RS04630 3-hydroxy-2-methylbutyryl-CoA dehydrogenase 0.18 HSERO_RS17115 methyltransferase type 11 — —
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS03440 3-hydroxy-2-methylbutyryl-CoA dehydrogenase 0.20 RR42_RS13575 SAM-dependent methyltransferase — —
Variovorax sp. OAS795 0.58 ABID97_RS10560 3-hydroxyacyl-CoA dehydrogenase 0.19 ABID97_RS14735 methyltransferase domain-containing protein low > 91
Castellaniella sp019104865 MT123 0.54 ABCV34_RS05365 3-hydroxyacyl-CoA dehydrogenase 0.21 ABCV34_RS10480 methyltransferase domain-containing protein — —
Marinobacter adhaerens HP15 0.53 HP15_1007 3-hydroxyacyl-CoA dehydrogenase type II 0.18 HP15_1804 generic methyl-transferase low > 73
Variovorax sp. SCN45 0.49 GFF2281 Short-chain dehydrogenase/reductase SDR 0.20 GFF1117 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) low > 127
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_4075 Short-chain dehydrogenase/reductase SDR 0.77 Psyr_1762 conserved hypothetical protein low > 86
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_4075 Short-chain dehydrogenase/reductase SDR 0.77 Psyr_1762 conserved hypothetical protein low > 86

Not shown: 38 genomes with orthologs for PP_2214 only; 2 genomes with orthologs for PP_4143 only