Conservation of cofitness between PP_1216 and PP_4120 in Pseudomonas putida KT2440

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1216 Holliday junction ATP-dependent DNA helicase RuvA 1.0 PP_4120 NADH-quinone oxidoreductase subunit B 0.29 18
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_1409 Holliday junction DNA helicase subunit RuvA 0.95 Psyr_3198 NADH dehydrogenase subunit B — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_1409 Holliday junction DNA helicase subunit RuvA 0.95 Psyr_3198 NADH dehydrogenase subunit B — —
Pseudomonas fluorescens FW300-N2E3 0.82 AO353_03585 ATP-dependent DNA helicase RuvA 0.95 AO353_27745 NADH dehydrogenase — —
Pseudomonas sp. S08-1 0.82 OH686_19130 Holliday junction DNA helicase RuvA 0.96 OH686_00150 NADH-ubiquinone oxidoreductase chain B — —
Pseudomonas sp. RS175 0.82 PFR28_03413 Holliday junction ATP-dependent DNA helicase RuvA 0.93 PFR28_02628 NADH-quinone oxidoreductase subunit B — —
Pseudomonas fluorescens GW456-L13 0.81 PfGW456L13_1852 Holliday junction DNA helicase RuvA 0.95 PfGW456L13_2632 NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) low > 87
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_638 Holliday junction DNA helicase RuvA 0.94 Pf1N1B4_4040 NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) — —
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_5536 Holliday junction DNA helicase RuvA 0.95 Pf6N2E2_276 NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) — —
Pseudomonas fluorescens SBW25 0.81 PFLU_RS24090 Holliday junction branch migration protein RuvA 0.95 PFLU_RS18620 NADH-quinone oxidoreductase subunit B low > 109
Pseudomonas simiae WCS417 0.81 PS417_22450 ATP-dependent DNA helicase RuvA 0.95 PS417_16580 NADH dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.81 PFLU_RS24090 Holliday junction branch migration protein RuvA 0.95 PFLU_RS18620 NADH-quinone oxidoreductase subunit B 0.37 12
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_18020 ATP-dependent DNA helicase RuvA 0.95 AO356_22065 NADH dehydrogenase — —
Shewanella oneidensis MR-1 0.56 SO2430 ruvA Holliday junction DNA helicase RuvA (NCBI ptt file) 0.81 SO1020 nuoB NADH dehydrogenase I, B subunit (NCBI ptt file) low > 76
Rahnella sp. WP5 0.54 EX31_RS11675 Holliday junction branch migration protein RuvA 0.81 EX31_RS19430 NADH-quinone oxidoreductase subunit B low > 89
Enterobacter asburiae PDN3 0.53 EX28DRAFT_0695 Holliday junction DNA helicase subunit RuvA 0.80 EX28DRAFT_0322 NADH-quinone oxidoreductase, B subunit — —
Escherichia fergusonii Becca 0.53 EFB2_02081 Holliday junction ATP-dependent DNA helicase RuvA 0.79 EFB2_01572 NADH-quinone oxidoreductase subunit B — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_01867 Holliday junction ATP-dependent DNA helicase RuvA 0.79 OHPLBJKB_01419 NADH-quinone oxidoreductase subunit B — —
Escherichia coli Nissle 1917 0.53 ECOLIN_RS10365 Holliday junction branch migration protein RuvA 0.79 ECOLIN_RS13280 NADH-quinone oxidoreductase subunit NuoB — —
Escherichia coli BW25113 0.53 b1861 ruvA Holliday junction DNA helicase motor protein (NCBI) 0.79 b2287 nuoB NADH dehydrogenase subunit B (NCBI) low > 76
Escherichia coli BL21 0.53 ECD_01832 component of RuvABC resolvasome, regulatory subunit 0.79 ECD_02212 NADH:ubiquinone oxidoreductase, chain B — —
Enterobacter sp. TBS_079 0.52 MPMX20_02767 Holliday junction ATP-dependent DNA helicase RuvA 0.80 MPMX20_03217 NADH-quinone oxidoreductase subunit B low > 85
Escherichia coli ECRC98 0.52 JDDGAC_00855 ruvA Holliday junction branch migration protein RuvA 0.79 JDDGAC_26810 nuoB NADH-quinone oxidoreductase subunit NuoB — —
Escherichia coli ECRC62 0.52 BNILDI_15515 ruvA Holliday junction branch migration protein RuvA 0.79 BNILDI_13385 nuoB NADH-quinone oxidoreductase subunit NuoB — —
Escherichia coli ECRC101 0.52 OKFHMN_26280 ruvA Holliday junction branch migration protein RuvA 0.79 OKFHMN_22845 nuoB NADH-quinone oxidoreductase subunit NuoB — —
Escherichia coli ECRC99 0.52 KEDOAH_01825 ruvA Holliday junction branch migration protein RuvA 0.79 KEDOAH_05350 nuoB NADH-quinone oxidoreductase subunit NuoB — —
Escherichia coli ECOR38 0.52 HEPCGN_04690 ruvA Holliday junction branch migration protein RuvA 0.79 HEPCGN_22050 nuoB NADH-quinone oxidoreductase subunit NuoB — —
Escherichia coli ECOR27 0.52 NOLOHH_16725 ruvA Holliday junction branch migration protein RuvA 0.79 NOLOHH_14465 nuoB NADH-quinone oxidoreductase subunit NuoB — —
Escherichia coli ECRC101 0.52 MCAODC_19125 ruvA Holliday junction branch migration protein RuvA 0.79 MCAODC_13885 nuoB NADH-quinone oxidoreductase subunit NuoB — —
Escherichia coli ECRC102 0.52 NIAGMN_01780 ruvA Holliday junction branch migration protein RuvA 0.79 NIAGMN_20615 nuoB NADH-quinone oxidoreductase subunit NuoB — —
Klebsiella michiganensis M5al 0.52 BWI76_RS18150 Holliday junction branch migration protein RuvA 0.80 BWI76_RS20185 NADH-quinone oxidoreductase subunit B — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF1640 Holliday junction DNA helicase RuvA 0.79 GFF1890 NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) — —
Pantoea sp. MT58 0.51 IAI47_08445 Holliday junction branch migration protein RuvA 0.80 IAI47_06365 NADH-quinone oxidoreductase subunit B low > 76
Erwinia tracheiphila SCR3 0.51 LU632_RS13415 ruvA Holliday junction branch migration protein RuvA 0.78 LU632_RS07970 NADH-quinone oxidoreductase subunit B — —
Dickeya dadantii 3937 0.50 DDA3937_RS10080 Holliday junction branch migration protein RuvA 0.78 DDA3937_RS14330 NADH-quinone oxidoreductase subunit B — —
Pectobacterium carotovorum WPP14 0.50 HER17_RS11845 Holliday junction branch migration protein RuvA 0.80 HER17_RS07130 NADH-quinone oxidoreductase subunit B — —
Dickeya dianthicola ME23 0.48 DZA65_RS10525 Holliday junction branch migration protein RuvA 0.78 DZA65_RS14980 NADH-quinone oxidoreductase subunit B — —
Serratia liquefaciens MT49 0.48 IAI46_14625 Holliday junction branch migration protein RuvA 0.80 IAI46_17705 NADH-quinone oxidoreductase subunit B — —
Dickeya dianthicola 67-19 0.48 HGI48_RS10110 Holliday junction branch migration protein RuvA 0.78 HGI48_RS14305 NADH-quinone oxidoreductase subunit B — —
Acinetobacter radioresistens SK82 0.45 MPMX26_02185 Holliday junction ATP-dependent DNA helicase RuvA 0.69 MPMX26_02554 NADH-quinone oxidoreductase subunit B — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.37 CA264_14545 Holliday junction branch migration protein RuvA 0.62 CA264_04265 NADH-quinone oxidoreductase subunit B — —
Rhodopseudomonas palustris CGA009 0.30 TX73_005655 Holliday junction branch migration protein RuvA 0.48 TX73_022085 NADH-quinone oxidoreductase subunit B — —
Agrobacterium fabrum C58 0.28 Atu3723 Holliday junction DNA helicase RuvA 0.32 Atu1269 NADH ubiqionone oxidoreductase chain B — —

Not shown: 59 genomes with orthologs for PP_1216 only; 0 genomes with orthologs for PP_4120 only