Conservation of cofitness between PP_2929 and PP_2928 in Pseudomonas putida KT2440

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2929 Carboxynorspermidine/carboxyspermidine decarboxylase 1.0 PP_2928 Saccharopine dehydrogenase 0.78 1
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_5137 Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) 0.96 Pf1N1B4_5136 Carboxynorspermidine dehydrogenase 0.65 1
Pseudomonas simiae WCS417 0.94 PS417_15465 carboxynorspermidine decarboxylase 0.95 PS417_15470 saccharopine dehydrogenase 0.31 2
Pseudomonas sp. RS175 0.94 PFR28_01527 Carboxynorspermidine/carboxyspermidine decarboxylase 0.92 PFR28_01528 Carboxynorspermidine synthase 0.53 2
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS17450 carboxynorspermidine decarboxylase 0.95 PFLU_RS17455 saccharopine dehydrogenase family protein 0.51 1
Pseudomonas fluorescens SBW25 0.93 PFLU_RS17450 carboxynorspermidine decarboxylase 0.95 PFLU_RS17455 saccharopine dehydrogenase family protein 0.73 5
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_1606 Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) 0.95 Pf6N2E2_1605 Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-) 0.73 1
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_23420 carboxynorspermidine decarboxylase 0.94 AO356_23425 saccharopine dehydrogenase 0.64 1
Pseudomonas stutzeri RCH2 0.90 Psest_1054 Diaminopimelate decarboxylase 0.89 Psest_1055 Saccharopine dehydrogenase and related proteins 0.87 1
Agrobacterium fabrum C58 0.79 Atu4169 carboxynorspermidine decarboxylase 0.75 Atu4170 hypothetical protein — —
Sinorhizobium meliloti 1021 0.76 SM_b21631 carboxynorspermidine decarboxylase 0.77 SM_b21630 hypothetical protein 0.70 1
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_08160 carboxynorspermidine decarboxylase 0.42 CSW01_08165 carboxynorspermidine synthase low > 62
Desulfovibrio vulgaris Hildenborough JW710 0.36 DVU0419 nspC carboxynorspermidine decarboxylase (TIGR) 0.35 DVU0418 lys1 saccharopine dehydrogenase (TIGR) 0.62 3
Desulfovibrio vulgaris Miyazaki F 0.34 DvMF_1532 carboxynorspermidine decarboxylase (RefSeq) 0.35 DvMF_1535 Saccharopine dehydrogenase (RefSeq) 0.76 3
Alteromonas macleodii MIT1002 0.33 MIT1002_03110 Carboxynorspermidine/carboxyspermidine decarboxylase 0.36 MIT1002_03109 Saccharopine dehydrogenase low > 70
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS14840 carboxynorspermidine decarboxylase 0.36 A4249_RS14845 saccharopine dehydrogenase family protein low > 48
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS03310 carboxynorspermidine decarboxylase 0.35 HMPREF1058_RS15975 saccharopine dehydrogenase family protein 0.87 1
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS17730 carboxynorspermidine decarboxylase 0.35 ABI39_RS11940 saccharopine dehydrogenase family protein 0.87 1
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS01805 carboxynorspermidine decarboxylase 0.33 HMPREF1078_RS00110 saccharopine dehydrogenase family protein 0.77 6
Bacteroides ovatus ATCC 8483 0.29 BACOVA_02371 carboxynorspermidine decarboxylase 0.35 BACOVA_05404 saccharopine dehydrogenase 0.90 1
Bacteroides thetaiotaomicron VPI-5482 0.28 BT0674 carboxynorspermidine decarboxylase (NCBI ptt file) 0.36 BT4612 conserved hypothetical protein (NCBI ptt file) 0.73 1
Bacteroides stercoris CC31F 0.28 HMPREF1181_RS16500 carboxynorspermidine decarboxylase 0.35 HMPREF1181_RS11900 saccharopine dehydrogenase family protein 0.92 1
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_0330 carboxynorspermidine decarboxylase (EC 4.1.1.-) 0.36 Ga0059261_0331 carboxynorspermidine dehydrogenase — —

Not shown: 0 genomes with orthologs for PP_2929 only; 0 genomes with orthologs for PP_2928 only