Conservation of cofitness between PP_3613 and PP_2907 in Pseudomonas putida KT2440

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_3613 L-sorbosone dehydrogenase 1.0 PP_2907 DNA-binding response regulator 0.19 6
Pseudomonas syringae pv. syringae B728a 0.87 Psyr_1787 L-sorbosone dehydrogenase 0.79 Psyr_3127 Response regulator receiver:Transcriptional regulatory protein, C-terminal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.87 Psyr_1787 L-sorbosone dehydrogenase 0.79 Psyr_3127 Response regulator receiver:Transcriptional regulatory protein, C-terminal low > 86
Pseudomonas fluorescens SBW25 0.84 PFLU_RS16750 sorbosone dehydrogenase family protein 0.81 PFLU_RS12570 response regulator transcription factor low > 109
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS16750 sorbosone dehydrogenase family protein 0.81 PFLU_RS12570 response regulator transcription factor low > 109
Pseudomonas simiae WCS417 0.84 PS417_14765 sorbosone dehydrogenase 0.81 PS417_11825 transcriptional regulator low > 88
Brevundimonas sp. GW460-12-10-14-LB2 0.60 A4249_RS03565 sorbosone dehydrogenase family protein 0.48 A4249_RS10810 response regulator transcription factor low > 48
Rhizobium sp. OAE497 0.51 ABIE40_RS30065 sorbosone dehydrogenase family protein 0.51 ABIE40_RS05700 response regulator transcription factor low > 107
Azospirillum sp. SherDot2 0.50 MPMX19_04964 hypothetical protein 0.53 MPMX19_00794 Transcriptional activator protein CopR low > 112
Variovorax sp. SCN45 0.49 GFF6912 L-sorbosone dehydrogenase 0.48 GFF2474 Two-component transcriptional response regulator SMc02366, LuxR family low > 127
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_5735 L-sorbosone dehydrogenase 0.79 Pf6N2E2_504 DNA-binding response regulator low > 103
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_19125 sorbosone dehydrogenase 0.79 AO356_23125 transcriptional regulator low > 104
Caulobacter crescentus NA1000 0.49 CCNA_00817 L-sorbosone dehydrogenase 0.47 CCNA_02845 two-component response regulator low > 66
Caulobacter crescentus NA1000 Δfur 0.49 CCNA_00817 L-sorbosone dehydrogenase 0.47 CCNA_02845 two-component response regulator low > 67
Sinorhizobium meliloti 1021 0.49 SM_b21364 membrane-anchored oxidoreductase, L-sorbosone dehydrogenase 0.50 SMc02366 transcriptional regulator low > 103
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_3704 L-sorbosone dehydrogenase 0.82 Pf1N1B4_4267 DNA-binding response regulator — —
Lysobacter sp. OAE881 0.49 ABIE51_RS01670 sorbosone dehydrogenase family protein 0.49 ABIE51_RS04165 response regulator transcription factor low > 62
Shewanella amazonensis SB2B 0.18 Sama_1065 putative membrane-bound dehydrogenase oxidoreductase protein (RefSeq) 0.46 Sama_3534 response regulator receiver protein (RefSeq) — —
Rhodanobacter sp. FW510-T8 0.16 OKGIIK_15010 Sorbosone dehydrogenase 0.48 OKGIIK_14885 ompR DNA-binding response regulator low > 52
Shewanella sp. ANA-3 0.16 Shewana3_2597 L-sorbosone dehydrogenase (SNDH) (RefSeq) 0.48 Shewana3_0282 two component transcriptional regulator (RefSeq) low > 73
Rhodopseudomonas palustris CGA009 0.16 TX73_003815 PQQ-dependent sugar dehydrogenase 0.53 TX73_009945 response regulator transcription factor low > 86
Shewanella oneidensis MR-1 0.15 SO3898 L-sorbosone dehydrogenase, putative (NCBI ptt file) 0.48 SO4428 DNA-binding response regulator (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.15 Shew_0550 L-sorbosone dehydrogenase, putative (RefSeq) 0.48 Shew_0097 two component transcriptional regulator (RefSeq) low > 60
Hydrogenophaga sp. GW460-11-11-14-LB1 0.08 GFF2800 L-sorbosone dehydrogenase 0.50 GFF1757 response regulator in two-component regulatory system with PhoQ low > 90

Not shown: 17 genomes with orthologs for PP_3613 only; 10 genomes with orthologs for PP_2907 only