Conservation of cofitness between PP_5085 and PP_2137 in Pseudomonas putida KT2440

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5085 malic enzyme B 1.0 PP_2137 beta-ketoadipyl CoA thiolase, beta component 0.36 11
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_1545 NADP-dependent malic enzyme (EC 1.1.1.40) 0.93 Pf1N1B4_3904 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) — —
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_09425 malate dehydrogenase 0.95 AO356_02325 3-ketoacyl-CoA thiolase low > 104
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_3762 NADP-dependent malic enzyme (EC 1.1.1.40) 0.93 Pf6N2E2_2289 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) — —
Pseudomonas stutzeri RCH2 0.92 Psest_3721 Malic enzyme 0.90 Psest_2653 fatty oxidation complex, beta subunit FadA — —
Pseudomonas sp. RS175 0.92 PFR28_05005 NADP-dependent malic enzyme 0.96 PFR28_01111 3-ketoacyl-CoA thiolase low > 88
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_283 NADP-dependent malic enzyme (EC 1.1.1.40) 0.95 PfGW456L13_4040 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 87
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_12460 malate dehydrogenase 0.95 AO353_00505 3-ketoacyl-CoA thiolase low > 101
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_0401 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) 0.95 Psyr_3289 3-ketoacyl-CoA thiolase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_0401 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) 0.95 Psyr_3289 3-ketoacyl-CoA thiolase low > 86
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS01995 malate dehydrogenase 0.95 PFLU_RS07655 acetyl-CoA C-acyltransferase FadA low > 109
Pseudomonas fluorescens SBW25 0.91 PFLU_RS01995 malate dehydrogenase 0.95 PFLU_RS07655 acetyl-CoA C-acyltransferase FadA low > 109
Pseudomonas simiae WCS417 0.90 PS417_01950 malate dehydrogenase 0.94 PS417_07580 3-ketoacyl-CoA thiolase — —
Pseudomonas sp. S08-1 0.88 OH686_10060 NADP-dependent malic enzyme 0.93 OH686_21930 acetyl-CoA C-acyltransferase FadA low > 80
Marinobacter adhaerens HP15 0.75 HP15_472 malate dehydrogenase (oxaloacetate-decarboxylating), NADP(+) 0.72 HP15_1513 Acetyl-CoA C-acyltransferase (EC 2.3.1.16) (from data) 0.41 46
Alteromonas macleodii MIT1002 0.69 MIT1002_03668 NADP-dependent malic enzyme 0.66 MIT1002_00574 3-ketoacyl-CoA thiolase low > 70
Shewanella loihica PV-4 0.66 Shew_0383 malate dehydrogenase (RefSeq) 0.66 Shew_0018 fadA 3-ketoacyl-CoA thiolase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.66 Sama_0448 malate dehydrogenase (RefSeq) 0.66 Sama_0031 fadA Acetyl-CoA C-acyltransferase (EC 2.3.1.16) (from data) 0.33 57
Shewanella oneidensis MR-1 0.65 SO4118 malate oxidoreductase, putative (NCBI ptt file) 0.65 SO0020 fadA fatty oxidation complex, beta subunit (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.64 Shewana3_3669 malic enzyme, NAD-binding (RefSeq) 0.65 Shewana3_0023 fadA Acetyl-CoA C-acyltransferase (EC 2.3.1.16) (from data) low > 73
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_13540 malate dehydrogenase 0.62 CSW01_13975 acetyl-CoA C-acyltransferase FadA low > 62
Kangiella aquimarina DSM 16071 0.35 B158DRAFT_0593 Malic enzyme 0.67 B158DRAFT_0355 fatty oxidation complex, beta subunit FadA low > 40

Not shown: 3 genomes with orthologs for PP_5085 only; 31 genomes with orthologs for PP_2137 only