Conservation of cofitness between PP_3378 and PP_1251 in Pseudomonas putida KT2440

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_3378 putative 2-ketogluconokinase 1.0 PP_1251 malate:quinone oxidoreductase 0.17 16
Pseudomonas simiae WCS417 0.68 PS417_12565 2-dehydro-3-deoxygluconokinase 0.83 PS417_07955 malate:quinone oxidoreductase low > 88
Pseudomonas fluorescens FW300-N1B4 0.68 Pf1N1B4_4765 2-ketogluconate kinase (EC 2.7.1.13) 0.78 Pf1N1B4_4189 Malate:quinone oxidoreductase (EC 1.1.5.4) low > 87
Pseudomonas fluorescens SBW25 0.68 PFLU_RS13250 sugar kinase 0.82 PFLU_RS07940 malate dehydrogenase (quinone) low > 109
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS13250 sugar kinase 0.82 PFLU_RS07940 malate dehydrogenase (quinone) low > 109
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_629 2-ketogluconate kinase (EC 2.7.1.13) 0.81 Pf6N2E2_1377 Malate:quinone oxidoreductase (EC 1.1.5.4) low > 103
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_24685 2-dehydro-3-deoxygluconokinase 0.80 AO356_28005 malate:quinone oxidoreductase low > 104
Pseudomonas sp. RS175 0.66 PFR28_01598 2-dehydro-3-deoxygluconokinase 0.80 PFR28_01823 Malate:quinone oxidoreductase low > 88
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_2950 2-ketogluconate kinase (EC 2.7.1.13) 0.78 PfGW456L13_3724 Malate:quinone oxidoreductase (EC 1.1.5.4) low > 87
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_26875 2-dehydro-3-deoxygluconokinase 0.81 AO353_28515 malate:quinone oxidoreductase low > 101
Enterobacter asburiae PDN3 0.55 EX28DRAFT_3815 Sugar kinases, ribokinase family 0.68 EX28DRAFT_0368 malate:quinone-oxidoreductase low > 76
Enterobacter sp. TBS_079 0.55 MPMX20_00179 2-dehydro-3-deoxygluconokinase 0.68 MPMX20_03168 Malate:quinone oxidoreductase low > 85
Klebsiella michiganensis M5al 0.54 BWI76_RS26950 2-dehydro-3-deoxygluconokinase 0.67 BWI76_RS16065 malate:quinone oxidoreductase low > 92
Serratia liquefaciens MT49 0.54 IAI46_00095 sugar kinase 0.66 IAI46_07765 malate:quinone oxidoreductase low > 86
Herbaspirillum seropedicae SmR1 0.54 HSERO_RS07545 2-dehydro-3-deoxygluconokinase 0.79 HSERO_RS21125 malate:quinone oxidoreductase low > 78
Pantoea sp. MT58 0.52 IAI47_00120 sugar kinase 0.67 IAI47_20405 malate dehydrogenase (quinone) 0.56 6
Erwinia tracheiphila SCR3 0.18 LU632_RS03295 aminoimidazole riboside kinase 0.66 LU632_RS02415 mqo malate dehydrogenase (quinone) low > 74
Escherichia coli ECOR27 0.17 NOLOHH_14150 cscK aminoimidazole riboside kinase 0.68 NOLOHH_14800 mqo malate dehydrogenase (quinone) low > 57
Escherichia coli ECRC62 0.17 BNILDI_13005 cscK aminoimidazole riboside kinase 0.68 BNILDI_13720 mqo malate dehydrogenase (quinone) — —
Escherichia coli ECOR38 0.17 HEPCGN_19180 aminoimidazole riboside kinase 0.68 HEPCGN_22490 mqo malate dehydrogenase (quinone) low > 85
Escherichia coli ECRC101 0.17 MCAODC_13000 cscK aminoimidazole riboside kinase 0.68 MCAODC_14275 mqo malate dehydrogenase (quinone) — —
Escherichia coli ECRC98 0.17 JDDGAC_26430 cscK aminoimidazole riboside kinase 0.68 JDDGAC_27185 mqo malate dehydrogenase (quinone) — —
Escherichia coli ECRC101 0.17 OKFHMN_22470 cscK aminoimidazole riboside kinase 0.68 OKFHMN_23225 mqo malate dehydrogenase (quinone) — —
Escherichia coli ECRC102 0.17 NIAGMN_20245 cscK aminoimidazole riboside kinase 0.68 NIAGMN_20990 mqo malate dehydrogenase (quinone) — —
Dickeya dianthicola ME23 0.17 DZA65_RS11450 carbohydrate kinase 0.63 DZA65_RS15510 malate dehydrogenase (quinone) low > 75
Escherichia coli BL21 0.17 ECD_01741 putative kinase 0.68 ECD_02137 malate dehydrogenase, FAD/NAD(P)-binding domain — —
Escherichia fergusonii Becca 0.17 EFB2_02222 putative sugar kinase YdjH 0.68 EFB2_01645 Malate:quinone oxidoreductase low > 86
Rahnella sp. WP5 0.17 EX31_RS00440 aminoimidazole riboside kinase 0.68 EX31_RS05365 malate:quinone oxidoreductase low > 89
Escherichia coli Nissle 1917 0.17 ECOLIN_RS09885 sugar kinase 0.68 ECOLIN_RS12910 malate dehydrogenase (quinone) — —
Escherichia coli BW25113 0.16 b1772 b1772 putative kinase (VIMSS) 0.68 b2210 mqo malate:quinone oxidoreductase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.16 OHPLBJKB_01960 putative sugar kinase YdjH 0.68 OHPLBJKB_01500 Malate:quinone oxidoreductase low > 73
Ralstonia solanacearum GMI1000 0.16 RS_RS22845 sugar kinase 0.75 RS_RS21010 malate dehydrogenase (quinone) low > 80
Ralstonia solanacearum UW163 0.16 UW163_RS20940 sugar kinase 0.75 UW163_RS19360 malate dehydrogenase (quinone) — —
Ralstonia solanacearum IBSBF1503 0.16 RALBFv3_RS18190 sugar kinase 0.75 RALBFv3_RS19815 malate dehydrogenase (quinone) low > 76
Pectobacterium carotovorum WPP14 0.16 HER17_RS19640 aminoimidazole riboside kinase 0.65 HER17_RS06860 malate dehydrogenase (quinone) low > 75
Ralstonia solanacearum PSI07 0.16 RPSI07_RS05445 sugar kinase 0.76 RPSI07_RS03370 malate dehydrogenase (quinone) low > 81
Dickeya dianthicola 67-19 0.15 HGI48_RS01780 aminoimidazole riboside kinase 0.63 HGI48_RS14570 malate dehydrogenase (quinone) low > 71
Dickeya dadantii 3937 0.15 DDA3937_RS01855 aminoimidazole riboside kinase 0.63 DDA3937_RS14620 malate dehydrogenase (quinone) low > 74
Escherichia coli ECRC99 0.15 KEDOAH_01345 rbsK sugar kinase 0.68 KEDOAH_04960 mqo malate dehydrogenase (quinone) — —
Agrobacterium fabrum C58 0.14 Atu3166 fructokinase 0.74 Atu0811 malate:quinone oxidoreductase low > 89

Not shown: 32 genomes with orthologs for PP_3378 only; 3 genomes with orthologs for PP_1251 only