| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_4852 | | Transcriptional regulator, AraC family | 1.0 | PP_1063 | | DNA-binding transcriptional regulator, homocysteine-binding | 0.15 | 10 |
| Pseudomonas fluorescens FW300-N1B4 | 0.62 | Pf1N1B4_1362 | | Transcriptional regulator, AraC family | 0.95 | Pf1N1B4_784 | | Transcriptional activator MetR | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.62 | PFLU_RS02820 | | AraC family transcriptional regulator | 0.95 | PFLU_RS05540 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.62 | PFLU_RS02820 | | AraC family transcriptional regulator | 0.95 | PFLU_RS05540 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas simiae WCS417 | 0.61 | PS417_02760 | | AraC family transcriptional regulator | 0.94 | PS417_05455 | | XRE family transcriptional regulator | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.61 | AO353_13450 | | AraC family transcriptional regulator | 0.95 | AO353_16210 | | XRE family transcriptional regulator | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.60 | PfGW456L13_100 | | Transcriptional regulator, AraC family | 0.95 | PfGW456L13_4778 | | Transcriptional activator MetR | low | > 87 |
| Cupriavidus basilensis FW507-4G11 | 0.55 | RR42_RS35075 | | AraC family transcriptional regulator | 0.46 | RR42_RS30655 | | LysR family transcriptional regulator | low | > 128 |
| Serratia liquefaciens MT49 | 0.43 | IAI46_17855 | | helix-turn-helix transcriptional regulator | 0.44 | IAI46_01030 | | HTH-type transcriptional regulator MetR | low | > 86 |
| Pseudomonas fluorescens FW300-N2E2 | 0.39 | Pf6N2E2_475 | | Transcriptional regulator, AraC family | 0.95 | Pf6N2E2_5471 | | Transcriptional activator MetR | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.39 | AO356_22960 | | AraC family transcriptional regulator | 0.95 | AO356_17735 | | XRE family transcriptional regulator | low | > 104 |
| Rahnella sp. WP5 | 0.39 | EX31_RS19615 | | helix-turn-helix transcriptional regulator | 0.43 | EX31_RS25370 | | HTH-type transcriptional regulator MetR | low | > 89 |
| Vibrio cholerae E7946 ATCC 55056 | 0.38 | CSW01_18815 | | AraC family transcriptional regulator | 0.51 | CSW01_08580 | | HTH-type transcriptional regulator MetR | low | > 62 |
| Shewanella sp. ANA-3 | 0.38 | Shewana3_0925 | | AraC family transcriptional regulator (RefSeq) | 0.41 | Shewana3_3470 | | LysR family transcriptional regulator (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.38 | SO1092 | | transcriptional regulator, AraC/XylS family (NCBI ptt file) | 0.41 | SO0817 | metR | transcriptional activator protein MetR (NCBI ptt file) | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.35 | RPSI07_RS07665 | | AraC family transcriptional regulator | 0.47 | RPSI07_RS02550 | | LysR family transcriptional regulator | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.35 | RALBFv3_RS23475 | | AraC family transcriptional regulator | 0.47 | RALBFv3_RS20315 | | LysR family transcriptional regulator | low | > 76 |
| Ralstonia solanacearum UW163 | 0.35 | UW163_RS16725 | | AraC family transcriptional regulator | 0.47 | UW163_RS18860 | | LysR family transcriptional regulator | — | — |
| Ralstonia solanacearum GMI1000 | 0.35 | RS_RS24975 | | AraC family transcriptional regulator | 0.46 | RS_RS20365 | | LysR family transcriptional regulator | low | > 80 |
| Acinetobacter radioresistens SK82 | 0.24 | MPMX26_00111 | | HTH-type transcriptional regulator NimR | 0.47 | MPMX26_01201 | | HTH-type transcriptional regulator MetR | — | — |
| Shewanella amazonensis SB2B | 0.20 | Sama_3308 | | AraC-type DNA-binding domain-containing protein (RefSeq) | 0.40 | Sama_2628 | | transcriptional activator protein MetR (RefSeq) | low | > 62 |