Conservation of cofitness between PP_4922 and PP_0612 in Pseudomonas putida KT2440

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4922 Phosphomethylpyrimidine synthase 1.0 PP_0612 FAD-dependent glycine/D-amino acid oxidase 0.52 14
Pseudomonas sp. RS175 0.92 PFR28_05091 Phosphomethylpyrimidine synthase 0.76 PFR28_03753 Glycine oxidase 0.39 41
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.77 Pf6N2E2_5120 Glycine oxidase ThiO (EC 1.4.3.19) low > 103
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_08810 thiamine biosynthesis protein ThiC 0.77 AO356_15895 D-amino acid oxidase 0.31 25
Pseudomonas syringae pv. syringae B728a ΔmexB 0.92 Psyr_0544 hydroxymethylpyrimidine synthase 0.76 Psyr_0721 glycine oxidase low > 86
Pseudomonas fluorescens SBW25 0.92 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.78 PFLU_RS03855 glycine oxidase ThiO low > 109
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.78 PFLU_RS03855 glycine oxidase ThiO 0.49 8
Pseudomonas syringae pv. syringae B728a 0.92 Psyr_0544 hydroxymethylpyrimidine synthase 0.76 Psyr_0721 glycine oxidase low > 86
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.80 PfGW456L13_1488 Glycine oxidase ThiO (EC 1.4.3.19) low > 87
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_13010 thiamine biosynthesis protein ThiC 0.79 AO353_14195 D-amino acid oxidase 0.65 5
Pseudomonas simiae WCS417 0.91 PS417_02355 thiamine biosynthesis protein ThiC 0.78 PS417_03805 D-amino acid oxidase low > 88
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.80 Pf1N1B4_2817 Glycine oxidase ThiO (EC 1.4.3.19) low > 87
Pseudomonas sp. S08-1 0.91 OH686_15885 phosphomethylpyrimidine synthase 0.66 OH686_16385 Glycine oxidase ThiO low > 80
Pseudomonas stutzeri RCH2 0.90 Psest_0477 thiamine biosynthesis protein ThiC 0.71 Psest_3368 glycine oxidase ThiO low > 67
Herbaspirillum seropedicae SmR1 0.78 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC 0.13 HSERO_RS05695 D-amino acid oxidase low > 78
Acinetobacter radioresistens SK82 0.77 MPMX26_00180 Phosphomethylpyrimidine synthase 0.42 MPMX26_02399 Glycine oxidase low > 36
Paraburkholderia bryophila 376MFSha3.1 0.77 H281DRAFT_00395 hydroxymethylpyrimidine synthase 0.13 H281DRAFT_06514 Glycine/D-amino acid oxidase (deaminating) low > 103
Ralstonia sp. UNC404CL21Col 0.74 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC 0.13 ABZR87_RS21570 FAD-binding oxidoreductase low > 80
Variovorax sp. SCN45 0.69 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.12 GFF7148 D-amino-acid oxidase (EC 1.4.3.3) low > 127
Variovorax sp. OAS795 0.68 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC 0.16 ABID97_RS28570 FAD-binding oxidoreductase low > 91
Acidovorax sp. GW101-3H11 0.67 Ac3H11_2027 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.13 Ac3H11_4171 D-amino-acid oxidase (EC 1.4.3.3) low > 79
Azospirillum brasilense Sp245 0.67 AZOBR_RS07940 phosphomethylpyrimidine synthase 0.22 AZOBR_RS30970 glycine oxidase low > 97
Agrobacterium fabrum C58 0.65 Atu2569 thiamine biosynthesis protein 0.13 Atu3414 AgaE protein low > 89
Azospirillum sp. SherDot2 0.64 MPMX19_00336 Phosphomethylpyrimidine synthase 0.20 MPMX19_00260 Hydrogen cyanide synthase subunit HcnC low > 112
Mycobacterium tuberculosis H37Rv 0.53 Rv0423c Probable thiamine biosynthesis protein ThiC 0.10 Rv0415 Possible thiamine biosynthesis oxidoreductase ThiO — —

Not shown: 69 genomes with orthologs for PP_4922 only; 1 genomes with orthologs for PP_0612 only