Conservation of cofitness between PFLU_RS03610 and PFLU_RS28775 in Pseudomonas fluorescens SBW25

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS03610 redox-regulated ATPase YchF 1.0 PFLU_RS28775 polyamine ABC transporter substrate-binding protein 0.82 7
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS03610 redox-regulated ATPase YchF 1.00 PFLU_RS28775 polyamine ABC transporter substrate-binding protein low > 109
Pseudomonas simiae WCS417 0.97 PS417_03560 GTP-binding protein 0.94 PS417_27125 spermidine/putrescine ABC transporter substrate-binding protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_16450 GTP-binding protein 0.86 AO356_13155 spermidine/putrescine ABC transporter substrate-binding protein low > 104
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_1574 GTP-binding and nucleic acid-binding protein YchF 0.86 PfGW456L13_928 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) 0.43 66
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_14740 GTP-binding protein 0.93 AO353_08580 spermidine/putrescine ABC transporter substrate-binding protein low > 101
Pseudomonas syringae pv. syringae B728a 0.96 Psyr_0941 Conserved hypothetical protein 92 0.87 Psyr_4865 extracellular solute-binding protein, family 1 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.96 Psyr_0941 Conserved hypothetical protein 92 0.87 Psyr_4865 extracellular solute-binding protein, family 1 low > 86
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_2912 GTP-binding and nucleic acid-binding protein YchF 0.85 Pf1N1B4_2259 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) low > 87
Pseudomonas sp. RS175 0.94 PFR28_03664 Ribosome-binding ATPase YchF 0.85 PFR28_04295 Putrescine-binding periplasmic protein SpuD low > 88
Pseudomonas putida KT2440 0.92 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase 0.78 PP_5181 spermidine/putrescine ABC transporter - periplasmic subunit low > 96
Pseudomonas sp. S08-1 0.90 OH686_07965 GTP-binding and nucleic acid-binding protein YchF 0.69 OH686_11465 Putrescine ABC transporter putrescine-binding protein PotF low > 80
Pseudomonas stutzeri RCH2 0.89 Psest_1103 GTP-binding protein YchF 0.72 Psest_4284 Spermidine/putrescine-binding periplasmic protein low > 67
Escherichia coli ECRC62 0.70 BNILDI_18805 ychF redox-regulated ATPase YchF 0.59 BNILDI_20585 potF spermidine/putrescine ABC transporter substrate-binding protein PotF low > 75
Escherichia coli ECRC99 0.70 KEDOAH_25405 ychF redox-regulated ATPase YchF 0.59 KEDOAH_21950 potF spermidine/putrescine ABC transporter substrate-binding protein PotF — —
Escherichia coli ECOR27 0.70 NOLOHH_20650 ychF redox-regulated ATPase YchF 0.59 NOLOHH_22330 potF spermidine/putrescine ABC transporter substrate-binding protein PotF — —
Escherichia coli ECRC100 0.70 OKFHMN_28410 ychF redox-regulated ATPase YchF 0.59 OKFHMN_05960 potF spermidine/putrescine ABC transporter substrate-binding protein PotF — —
Escherichia coli BW25113 0.70 b1203 ychF translation-associated GTPase (NCBI) 0.59 b0854 potF putrescine transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) — —
Escherichia coli ECRC101 0.70 MCAODC_21850 ychF redox-regulated ATPase YchF 0.59 MCAODC_25175 potF spermidine/putrescine ABC transporter substrate-binding protein PotF low > 87
Escherichia coli Nissle 1917 0.70 ECOLIN_RS07280 redox-regulated ATPase YchF 0.58 ECOLIN_RS04550 spermidine/putrescine ABC transporter substrate-binding protein PotF low > 55
Escherichia fergusonii Becca 0.70 EFB2_02724 Ribosome-binding ATPase YchF 0.58 EFB2_03207 Putrescine-binding periplasmic protein low > 86
Escherichia coli ECRC98 0.70 JDDGAC_06165 ychF redox-regulated ATPase YchF 0.59 JDDGAC_09595 potF spermidine/putrescine ABC transporter substrate-binding protein PotF low > 86
Escherichia coli ECRC102 0.70 NIAGMN_27825 ychF redox-regulated ATPase YchF 0.59 NIAGMN_04005 potF spermidine/putrescine ABC transporter substrate-binding protein PotF — —
Escherichia coli ECOR38 0.70 HEPCGN_24875 ychF redox-regulated ATPase YchF 0.59 HEPCGN_02070 potF spermidine/putrescine ABC transporter substrate-binding protein PotF low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_02484 Ribosome-binding ATPase YchF 0.59 OHPLBJKB_02814 Putrescine-binding periplasmic protein low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF2784 GTP-binding and nucleic acid-binding protein YchF 0.58 GFF758 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) low > 78
Escherichia coli BL21 0.70 ECD_01178 catalase inhibitor protein; ATPase, K+-dependent, ribosome-associated 0.59 ECD_00859 putrescine ABC transporter periplasmic binding protein — —
Pantoea sp. MT58 0.69 IAI47_11310 redox-regulated ATPase YchF 0.57 IAI47_13045 spermidine/putrescine ABC transporter substrate-binding protein PotF low > 76
Pectobacterium carotovorum WPP14 0.69 HER17_RS10445 redox-regulated ATPase YchF 0.59 HER17_RS12500 spermidine/putrescine ABC transporter substrate-binding protein PotF low > 75
Klebsiella michiganensis M5al 0.68 BWI76_RS17485 GTP-binding protein YchF 0.58 BWI76_RS09460 spermidine/putrescine ABC transporter substrate-binding protein PotF — —
Enterobacter sp. TBS_079 0.68 MPMX20_02645 Ribosome-binding ATPase YchF 0.59 MPMX20_01495 Putrescine-binding periplasmic protein low > 85
Rahnella sp. WP5 0.68 EX31_RS07380 redox-regulated ATPase YchF 0.59 EX31_RS09630 spermidine/putrescine ABC transporter substrate-binding protein PotF low > 89
Enterobacter asburiae PDN3 0.67 EX28DRAFT_0821 GTP-binding protein YchF 0.59 EX28DRAFT_2099 Spermidine/putrescine-binding periplasmic protein — —
Serratia liquefaciens MT49 0.67 IAI46_10240 redox-regulated ATPase YchF 0.57 IAI46_08370 spermidine/putrescine ABC transporter substrate-binding protein PotF — —
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS17445 GTP-binding protein YchF 0.49 BPHYT_RS26645 ABC transporter substrate-binding protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_05705 hypothetical protein 0.49 H281DRAFT_05180 putrescine transport system substrate-binding protein low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF630 GTP-binding and nucleic acid-binding protein YchF 0.38 GFF2035 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) low > 90
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS27600 redox-regulated ATPase YchF 0.49 QEN71_RS07120 polyamine ABC transporter substrate-binding protein low > 153
Magnetospirillum magneticum AMB-1 0.58 AMB_RS21985 redox-regulated ATPase YchF 0.47 AMB_RS13210 polyamine ABC transporter substrate-binding protein — —

Not shown: 64 genomes with orthologs for PFLU_RS03610 only; 1 genomes with orthologs for PFLU_RS28775 only