Conservation of cofitness between PFLU_RS06475 and PFLU_RS11560 in Pseudomonas fluorescens SBW25

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS06475 ABC transporter permease 1.0 PFLU_RS11560 aldolase 0.50 6
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS06475 ABC transporter permease 1.00 PFLU_RS11560 aldolase low > 109
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_3875 amino acid ABC transporter membrane protein 1, PAAT family 0.80 Psyr_0464 hypothetical protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_3875 amino acid ABC transporter membrane protein 1, PAAT family 0.80 Psyr_0464 hypothetical protein low > 86
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_3178 Histidine ABC transporter, permease protein HisQ (TC 3.A.1.3.1) 0.91 Pf1N1B4_5075 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases — —
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_00223 amino acid ABC transporter membrane protein 1, PAAT family 0.74 H281DRAFT_01508 Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase low > 103
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS23395 histidine ABC transporter permease HisQ 0.75 QEN71_RS17920 aldolase low > 153
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS05505 histidine/lysine/arginine/ornithine ABC transporter permease HisQ 0.75 BPHYT_RS29405 aldolase — —
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS29650 histidine ABC transporter permease 0.73 RR42_RS10970 aldolase low > 128
Paraburkholderia graminis OAS925 0.59 ABIE53_001350 histidine transport system permease protein 0.75 ABIE53_005173 ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase low > 113
Serratia liquefaciens MT49 0.57 IAI46_17795 histidine ABC transporter permease HisQ 0.39 IAI46_07595 aldolase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF1917 Histidine ABC transporter, permease protein HisQ (TC 3.A.1.3.1) 0.36 GFF4780 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases low > 78
Enterobacter sp. TBS_079 0.57 MPMX20_03243 Histidine transport system permease protein HisQ 0.13 MPMX20_00475 L-ribulose-5-phosphate 4-epimerase UlaF low > 85
Escherichia coli ECRC62 0.56 BNILDI_13275 hisQ histidine ABC transporter permease HisQ 0.39 BNILDI_10895 otnC aldolase low > 75
Escherichia coli BW25113 0.56 b2308 hisQ histidine/lysine/arginine/ornithine transporter subunit (NCBI) 0.39 b2738 ygbL hypothetical protein (NCBI) low > 76
Escherichia coli BL21 0.56 ECD_02233 histidine ABC transporter permease 0.39 ECD_02588 putative class II aldolase low > 61
Escherichia coli Nissle 1917 0.56 ECOLIN_RS13385 histidine ABC transporter permease HisQ 0.40 ECOLIN_RS15300 aldolase — —
Enterobacter asburiae PDN3 0.56 EX28DRAFT_0296 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 0.11 EX28DRAFT_3653 L-ribulose-5-phosphate 4-epimerase low > 76
Escherichia coli ECOR27 0.56 NOLOHH_14355 hisQ histidine ABC transporter permease HisQ 0.39 NOLOHH_12345 otnC aldolase low > 75
Escherichia coli ECOR38 0.56 HEPCGN_21930 hisQ histidine ABC transporter permease HisQ 0.18 HEPCGN_19415 fucA L-fuculose-phosphate aldolase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_01397 Histidine transport system permease protein HisQ 0.39 OHPLBJKB_00995 3-oxo-tetronate 4-phosphate decarboxylase low > 73
Escherichia fergusonii Becca 0.56 EFB2_01550 Histidine transport system permease protein HisQ 0.40 EFB2_01174 3-oxo-tetronate 4-phosphate decarboxylase low > 86
Klebsiella michiganensis M5al 0.56 BWI76_RS20330 histidine/lysine/arginine/ornithine ABC transporter permease HisQ 0.18 BWI76_RS22915 L-fuculose phosphate aldolase (EC 4.1.2.17) (from data) low > 92
Escherichia coli ECRC102 0.56 NIAGMN_20505 hisQ histidine ABC transporter permease HisQ 0.18 NIAGMN_17930 fucA L-fuculose-phosphate aldolase — —
Escherichia coli ECRC99 0.56 KEDOAH_05460 hisQ histidine ABC transporter permease HisQ 0.18 KEDOAH_07970 fucA L-fuculose-phosphate aldolase — —
Escherichia coli ECRC98 0.56 JDDGAC_26695 hisQ histidine ABC transporter permease HisQ 0.18 JDDGAC_23825 fucA L-fuculose-phosphate aldolase low > 86
Escherichia coli ECRC100 0.56 OKFHMN_22735 hisQ histidine ABC transporter permease HisQ 0.18 OKFHMN_20160 fucA L-fuculose-phosphate aldolase low > 80
Pantoea sp. MT58 0.55 IAI47_06290 histidine ABC transporter permease HisQ 0.39 IAI47_07150 aldolase low > 76
Rahnella sp. WP5 0.55 EX31_RS19555 ABC transporter permease subunit 0.14 EX31_RS04940 L-ribulose-5-phosphate 4-epimerase low > 89
Pectobacterium carotovorum WPP14 0.51 HER17_RS07035 histidine ABC transporter permease HisQ 0.39 HER17_RS00555 aldolase low > 75
Rhizobium sp. OAE497 0.36 ABIE40_RS25685 ABC transporter permease subunit 0.18 ABIE40_RS23995 class II aldolase/adducin family protein low > 107
Dinoroseobacter shibae DFL-12 0.23 Dshi_2223 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.39 Dshi_1553 class II aldolase/adducin family protein (RefSeq) low > 64

Not shown: 12 genomes with orthologs for PFLU_RS06475 only; 18 genomes with orthologs for PFLU_RS11560 only