Conservation of cofitness between NOLOHH_06475 and NOLOHH_21145 in Escherichia coli ECOR27

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_06475 pldB lysophospholipase L2 1.0 NOLOHH_21145 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.78 9
Escherichia coli Nissle 1917 1.00 ECOLIN_RS21960 lysophospholipase L2 1.00 ECOLIN_RS06280 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECRC62 1.00 BNILDI_05055 pldB lysophospholipase L2 1.00 BNILDI_19305 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 75
Escherichia coli BW25113 1.00 b3825 pldB lysophospholipase L(2) (NCBI) 1.00 b1086 rluC 23S rRNA pseudouridylate synthase (NCBI) low > 76
Escherichia coli BL21 1.00 ECD_03704 lysophospholipase L2 1.00 ECD_01082 23S rRNA pseudouridine(955,2504,2580) synthase low > 61
Escherichia fergusonii Becca 1.00 EFB2_04812 Lysophospholipase L2 1.00 EFB2_02889 Ribosomal large subunit pseudouridine synthase C low > 86
Escherichia coli ECRC99 1.00 KEDOAH_13805 pldB lysophospholipase L2 1.00 KEDOAH_24140 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECRC102 1.00 NIAGMN_12100 pldB lysophospholipase L2 1.00 NIAGMN_24215 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECRC98 1.00 JDDGAC_17970 pldB lysophospholipase L2 1.00 JDDGAC_07275 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04226 Lysophospholipase L2 1.00 OHPLBJKB_02580 Ribosomal large subunit pseudouridine synthase C low > 73
Escherichia coli ECRC101 1.00 MCAODC_04850 pldB lysophospholipase L2 1.00 MCAODC_22975 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 87
Escherichia coli ECRC100 1.00 OKFHMN_14345 pldB lysophospholipase L2 1.00 OKFHMN_03615 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 80
Escherichia coli ECOR38 1.00 HEPCGN_13045 pldB lysophospholipase L2 1.00 HEPCGN_23865 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF251 Lysophospholipase L2 (EC 3.1.1.5) 0.98 GFF3366 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) low > 78
Enterobacter sp. TBS_079 0.83 MPMX20_04455 Lysophospholipase L2 0.89 MPMX20_01766 Ribosomal large subunit pseudouridine synthase C low > 85
Enterobacter asburiae PDN3 0.82 EX28DRAFT_4490 Lysophospholipase 0.92 EX28DRAFT_1844 pseudouridine synthase, RluA family low > 76
Klebsiella michiganensis M5al 0.80 BWI76_RS01260 lysophospholipase L2 0.93 BWI76_RS11050 23S rRNA pseudouridine(955/2504/2580) synthase low > 92
Serratia liquefaciens MT49 0.63 IAI46_00785 lysophospholipase L2 0.80 IAI46_09755 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 86
Pantoea sp. MT58 0.62 IAI47_18340 lysophospholipase L2 0.85 IAI47_12105 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 76
Rahnella sp. WP5 0.61 EX31_RS15225 lysophospholipase L2 0.82 EX31_RS24400 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 89
Erwinia tracheiphila SCR3 0.59 LU632_RS24080 pldB lysophospholipase L2 0.85 LU632_RS14855 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 74
Dickeya dianthicola ME23 0.58 DZA65_RS21030 lysophospholipase L2 0.80 DZA65_RS13690 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 75
Dickeya dadantii 3937 0.58 DDA3937_RS19830 lysophospholipase L2 0.80 DDA3937_RS13155 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 74
Dickeya dianthicola 67-19 0.57 HGI48_RS19985 lysophospholipase L2 0.80 HGI48_RS13220 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 71
Pectobacterium carotovorum WPP14 0.56 HER17_RS01410 lysophospholipase L2 0.81 HER17_RS08615 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 75
Shewanella loihica PV-4 0.32 Shew_3723 alpha/beta hydrolase fold (RefSeq) 0.66 Shew_1594 RluA family pseudouridine synthase (RefSeq) low > 60
Shewanella sp. ANA-3 0.31 Shewana3_4119 alpha/beta hydrolase fold (RefSeq) 0.65 Shewana3_2566 ribosomal large subunit pseudouridine synthase C (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_00685 lysophospholipase 0.63 CSW01_10130 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 62
Shewanella amazonensis SB2B 0.27 Sama_0083 alpha/beta hydrolase fold (RefSeq) 0.63 Sama_1988 pseudouridylate synthase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.27 MIT1002_00479 lysophospholipase L2 0.63 MIT1002_01725 Ribosomal large subunit pseudouridine synthase C low > 70
Dinoroseobacter shibae DFL-12 0.16 Dshi_0780 alpha/beta hydrolase fold (RefSeq) 0.23 Dshi_0315 pseudouridine synthase, RluA family (RefSeq) low > 64
Agrobacterium fabrum C58 0.16 Atu3886 lysophospholipase 0.26 Atu1471 ribosomal large subunit pseudouridine synthase C — —
Rhizobium sp. OAE497 0.15 ABIE40_RS16315 alpha/beta hydrolase 0.26 ABIE40_RS09915 RluA family pseudouridine synthase low > 107
Caulobacter crescentus NA1000 0.15 CCNA_02336 lysophospholipase L2 0.24 CCNA_02059 ribosomal large subunit pseudouridine synthase C low > 66
Caulobacter crescentus NA1000 Δfur 0.15 CCNA_02336 lysophospholipase L2 0.24 CCNA_02059 ribosomal large subunit pseudouridine synthase C low > 67
Sinorhizobium meliloti 1021 0.15 SMc04041 lysophospholipase L2 protein 0.26 SMc01275 ribosomal large subunit pseudouridine synthase C protein — —
Phaeobacter inhibens DSM 17395 0.15 PGA1_c07480 Lysophospholipase 0.25 PGA1_c01950 ribosomal large subunit pseudouridine synthase C — —
Azospirillum sp. SherDot2 0.15 MPMX19_00440 Lysophospholipase L2 0.24 MPMX19_01718 Ribosomal large subunit pseudouridine synthase C low > 112
Brevundimonas sp. GW460-12-10-14-LB2 0.14 A4249_RS12480 alpha/beta hydrolase 0.25 A4249_RS07865 RluA family pseudouridine synthase low > 48

Not shown: 3 genomes with orthologs for NOLOHH_06475 only; 43 genomes with orthologs for NOLOHH_21145 only