| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Azospirillum sp. SherDot2 | 1.0 | MPMX19_03278 | | hypothetical protein | 1.0 | MPMX19_03563 | | Propane 2-monooxygenase, reductase component | 0.37 | 15 |
| Pseudomonas fluorescens FW300-N2E3 | 0.49 | AO353_24800 | | spermidine/putrescine ABC transporter substrate-binding protein | 0.24 | AO353_05960 | | anthranilate dioxygenase reductase | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.49 | IKLFDK_24470 | | Gamma-aminobutyric acid-binding protein | 0.23 | IKLFDK_12350 | | anthranilate 1 2-dioxygenase electron transfer component AntC | low | > 100 |
| Pseudomonas fluorescens FW300-N2E2 | 0.48 | Pf6N2E2_1338 | | ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) | 0.24 | Pf6N2E2_1936 | | 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen reductase-like | low | > 103 |
| Pseudomonas sp. RS175 | 0.48 | PFR28_02135 | | hypothetical protein | 0.18 | PFR28_04335 | | CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase | low | > 88 |
| Pseudomonas putida KT2440 | 0.48 | PP_2870 | | putative spermidine/putrescine-binding periplasmic protein | 0.20 | PP_3163 | | benzoate 1,2-dioxygenase electron transfer component | low | > 96 |
| Pseudomonas fluorescens GW456-L13 | 0.47 | PfGW456L13_3217 | | ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) | 0.22 | PfGW456L13_3817 | | Benzoate 1,2-dioxygenase, ferredoxin reductase component | low | > 87 |
| Paraburkholderia sabiae LMG 24235 | 0.47 | QEN71_RS17365 | | ABC transporter substrate-binding protein | 0.28 | QEN71_RS03135 | | CDP-6-deoxy-delta-3,4-glucoseen reductase | low | > 153 |
| Pseudomonas fluorescens FW300-N2C3 | 0.47 | AO356_25405 | | spermidine/putrescine ABC transporter substrate-binding protein | 0.24 | AO356_30365 | | CDP-6-deoxy-delta-3,4-glucoseen reductase | low | > 104 |
| Pseudomonas sp. BP01 | 0.47 | JOY50_RS05775 | | ABC transporter substrate-binding protein | 0.19 | JOY50_RS28345 | benC | benzoate 1,2-dioxygenase electron transfer component BenC | — | — |
| Castellaniella sp019104865 MT123 | 0.47 | ABCV34_RS01755 | | ABC transporter substrate-binding protein | 0.23 | ABCV34_RS06165 | | CDP-6-deoxy-delta-3,4-glucoseen reductase | low | > 48 |
| Pseudomonas sp. SVBP6 | 0.46 | COO64_RS21050 | | ABC transporter substrate-binding protein | 0.21 | COO64_RS01950 | benC | benzoate 1,2-dioxygenase electron transfer component BenC | low | > 93 |
| Herbaspirillum seropedicae SmR1 | 0.46 | HSERO_RS05410 | | spermidine/putrescine ABC transporter substrate-binding protein | 0.26 | HSERO_RS16665 | | CDP-6-deoxy-delta-3,4-glucoseen reductase | low | > 78 |
| Burkholderia phytofirmans PsJN | 0.46 | BPHYT_RS34095 | | spermidine/putrescine ABC transporter substrate-binding protein | 0.28 | BPHYT_RS15575 | | CDP-6-deoxy-delta-3,4-glucoseen reductase | low | > 109 |
| Ralstonia sp. UNC404CL21Col | 0.46 | ABZR87_RS12695 | | ABC transporter substrate-binding protein | 0.27 | ABZR87_RS00280 | | CDP-6-deoxy-delta-3,4-glucoseen reductase | low | > 80 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.46 | H281DRAFT_03507 | | putative spermidine/putrescine transport system substrate-binding protein | 0.28 | H281DRAFT_04056 | | CDP-4-dehydro-6-deoxyglucose reductase | low | > 103 |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS08755 | | ABC transporter substrate-binding protein | 0.27 | RS_RS12220 | | CDP-6-deoxy-delta-3,4-glucoseen reductase | — | — |
| Pseudomonas sp. S08-1 | 0.46 | OH686_15090 | | Spermidine/putrescine import ABC transporter substrate-binding protein PotD | 0.18 | OH686_11255 | | ase-related protein | low | > 80 |
| Ralstonia solanacearum UW163 | 0.45 | UW163_RS14550 | | ABC transporter substrate-binding protein | 0.27 | UW163_RS09010 | | CDP-6-deoxy-delta-3,4-glucoseen reductase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.45 | RALBFv3_RS01240 | | ABC transporter substrate-binding protein | 0.27 | RALBFv3_RS04660 | | CDP-6-deoxy-delta-3,4-glucoseen reductase | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.45 | RPSI07_RS16235 | | ABC transporter substrate-binding protein | 0.27 | RPSI07_RS12725 | | CDP-6-deoxy-delta-3,4-glucoseen reductase | — | — |
| Pseudomonas stutzeri RCH2 | 0.45 | Psest_3657 | | Spermidine/putrescine-binding periplasmic protein | 0.21 | Psest_2697 | | 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases | low | > 67 |
Not shown: 7 genomes with orthologs for MPMX19_03278 only; 48 genomes with orthologs for MPMX19_03563 only