Conservation of cofitness between IAI46_05555 and IAI46_21410 in Serratia liquefaciens MT49

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_05555 type VI secretion system baseplate subunit TssG 1.0 IAI46_21410 YggS family pyridoxal phosphate-dependent enzyme 0.45 11
Rahnella sp. WP5 0.62 EX31_RS00970 type VI secretion system baseplate subunit TssG 0.68 EX31_RS02685 YggS family pyridoxal phosphate-dependent enzyme low > 89
Pantoea sp. MT58 0.47 IAI47_14265 type VI secretion system baseplate subunit TssG 0.72 IAI47_03595 YggS family pyridoxal phosphate-dependent enzyme low > 76
Pseudomonas syringae pv. syringae B728a 0.24 Psyr_4957 Protein of unknown function DUF1305 0.51 Psyr_0477 Protein of unknown function UPF0001 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.24 Psyr_4957 Protein of unknown function DUF1305 0.51 Psyr_0477 Protein of unknown function UPF0001 low > 86
Pseudomonas putida KT2440 0.24 PP_3096 conserved protein of unknown function 0.53 PP_5094 putative enzyme with PLP binding domain low > 96
Ralstonia solanacearum IBSBF1503 0.18 RALBFv3_RS20030 type VI secretion system baseplate subunit TssG 0.46 RALBFv3_RS05575 YggS family pyridoxal phosphate-dependent enzyme low > 76
Ralstonia solanacearum UW163 0.18 UW163_RS19145 type VI secretion system baseplate subunit TssG 0.46 UW163_RS08050 YggS family pyridoxal phosphate-dependent enzyme — —
Ralstonia solanacearum GMI1000 0.18 RS_RS20695 type VI secretion system baseplate subunit TssG 0.47 RS_RS13435 YggS family pyridoxal phosphate-dependent enzyme low > 80
Ralstonia sp. UNC404CL21Col 0.18 ABZR87_RS20215 type VI secretion system baseplate subunit TssG 0.47 ABZR87_RS01225 YggS family pyridoxal phosphate-dependent enzyme low > 80
Ralstonia solanacearum PSI07 0.18 RPSI07_RS02945 type VI secretion system baseplate subunit TssG 0.46 RPSI07_RS11725 YggS family pyridoxal phosphate-dependent enzyme low > 81
Paraburkholderia sabiae LMG 24235 0.17 QEN71_RS31720 type VI secretion system baseplate subunit TssG 0.51 QEN71_RS26595 YggS family pyridoxal phosphate-dependent enzyme low > 153
Paraburkholderia graminis OAS925 0.16 ABIE53_006454 type VI secretion system protein ImpH 0.51 ABIE53_000841 pyridoxal phosphate enzyme (YggS family) 0.24 82
Pseudomonas simiae WCS417 0.15 PS417_27975 type VI secretion protein 0.54 PS417_26725 hypothetical protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.15 PFLU_RS29655 type VI secretion system baseplate subunit TssG 0.53 PFLU_RS28370 YggS family pyridoxal phosphate-dependent enzyme low > 109
Pseudomonas fluorescens SBW25 0.15 PFLU_RS29655 type VI secretion system baseplate subunit TssG 0.53 PFLU_RS28370 YggS family pyridoxal phosphate-dependent enzyme low > 109
Burkholderia phytofirmans PsJN 0.15 BPHYT_RS24420 type VI secretion protein 0.51 BPHYT_RS03495 hypothetical protein low > 109
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS03725 type VI secretion protein 0.53 HSERO_RS18995 hypothetical protein low > 78
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.13 GFF4049 Uncharacterized protein ImpH/VasB 0.70 GFF3054 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC low > 78
Dyella japonica UNC79MFTsu3.2 0.11 ABZR86_RS04935 type VI secretion system baseplate subunit TssG 0.26 ABZR86_RS09305 YggS family pyridoxal phosphate-dependent enzyme — —
Vibrio cholerae E7946 ATCC 55056 0.10 CSW01_14570 type VI secretion system baseplate subunit TssG 0.61 CSW01_02455 YggS family pyridoxal phosphate enzyme low > 62
Pseudomonas stutzeri RCH2 0.10 Psest_0126 type VI secretion protein, VC_A0111 family 0.52 Psest_0284 pyridoxal phosphate enzyme, YggS family low > 67
Pectobacterium carotovorum WPP14 0.09 HER17_RS04860 type VI secretion system baseplate subunit TssG 0.70 HER17_RS03810 YggS family pyridoxal phosphate-dependent enzyme low > 75

Not shown: 0 genomes with orthologs for IAI46_05555 only; 79 genomes with orthologs for IAI46_21410 only