Conservation of cofitness between IAI46_03985 and IAI46_00700 in Serratia liquefaciens MT49

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_03985 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 1.0 IAI46_00700 class I adenylate cyclase 0.69 7
Rahnella sp. WP5 0.92 EX31_RS07570 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.92 EX31_RS15150 class I adenylate cyclase low > 89
Pectobacterium carotovorum WPP14 0.91 HER17_RS05400 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.84 HER17_RS01320 class I adenylate cyclase low > 75
Dickeya dadantii 3937 0.91 DDA3937_RS16110 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.85 DDA3937_RS19915 class I adenylate cyclase low > 74
Dickeya dianthicola ME23 0.90 DZA65_RS17330 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.85 DZA65_RS21115 class I adenylate cyclase low > 75
Dickeya dianthicola 67-19 0.90 HGI48_RS16235 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.85 HGI48_RS20070 class I adenylate cyclase 0.83 11
Pantoea sp. MT58 0.89 IAI47_04425 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.84 IAI47_18420 class I adenylate cyclase low > 76
Escherichia coli ECRC101 0.88 MCAODC_11780 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.85 MCAODC_04950 cyaA class I adenylate cyclase — —
Escherichia coli ECOR38 0.88 HEPCGN_20375 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.85 HEPCGN_13165 cyaA class I adenylate cyclase low > 85
Escherichia coli ECRC99 0.88 KEDOAH_06970 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.85 KEDOAH_13705 cyaA class I adenylate cyclase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.88 OHPLBJKB_01112 Ribosomal large subunit pseudouridine synthase D 0.85 OHPLBJKB_04247 Adenylate cyclase low > 73
Escherichia coli BW25113 0.88 b2594 rluD 23S rRNA pseudouridine synthase (NCBI) 0.85 b3806 cyaA adenylate cyclase (NCBI) — —
Escherichia coli BL21 0.88 ECD_02484 23S rRNA pseudouridine(1911,1915,1917) synthase 0.85 ECD_03681 adenylate cyclase low > 60
Escherichia fergusonii Becca 0.88 EFB2_01296 Ribosomal large subunit pseudouridine synthase D 0.85 EFB2_04832 Adenylate cyclase low > 86
Escherichia coli ECRC102 0.88 NIAGMN_19020 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.85 NIAGMN_12200 cyaA class I adenylate cyclase — —
Escherichia coli Nissle 1917 0.88 ECOLIN_RS14675 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.85 ECOLIN_RS21840 class I adenylate cyclase low > 52
Escherichia coli ECRC98 0.88 JDDGAC_24915 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.85 JDDGAC_18070 cyaA class I adenylate cyclase — —
Escherichia coli ECRC101 0.88 OKFHMN_21250 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.85 OKFHMN_14445 cyaA class I adenylate cyclase — —
Enterobacter sp. TBS_079 0.88 MPMX20_03463 Ribosomal large subunit pseudouridine synthase D 0.86 MPMX20_04469 Adenylate cyclase low > 85
Enterobacter asburiae PDN3 0.87 EX28DRAFT_2695 pseudouridine synthase, RluA family 0.86 EX28DRAFT_4475 Adenylate cyclase low > 76
Escherichia coli ECOR27 0.87 NOLOHH_12925 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.85 NOLOHH_06590 cyaA class I adenylate cyclase low > 57
Klebsiella michiganensis M5al 0.87 BWI76_RS21450 23S rRNA pseudouridine(1911/1915/1917) synthase 0.85 BWI76_RS01185 adenylate cyclase low > 92
Escherichia coli ECRC62 0.87 BNILDI_11730 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.85 BNILDI_04945 cyaA class I adenylate cyclase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF4182 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) 0.85 GFF230 Adenylate cyclase (EC 4.6.1.1) low > 78
Erwinia tracheiphila SCR3 0.86 LU632_RS16945 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.84 LU632_RS24155 class I adenylate cyclase low > 74
Vibrio cholerae E7946 ATCC 55056 0.70 CSW01_03695 ribosomal large subunit pseudouridine synthase D 0.54 CSW01_00620 class I adenylate cyclase low > 62
Shewanella sp. ANA-3 0.65 Shewana3_3171 ribosomal large subunit pseudouridine synthase D (RefSeq) 0.23 Shewana3_0387 cyaA adenylate cyclase (RefSeq) low > 73
Shewanella loihica PV-4 0.64 Shew_2950 RluA family pseudouridine synthase (RefSeq) 0.24 Shew_0319 cyaA adenylate cyclase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.62 Sama_2605 pseudouridylate synthase (RefSeq) 0.22 Sama_3253 cyaA adenylate cyclase (RefSeq) — —
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_15925 ribosomal large subunit pseudouridine synthase D 0.25 AO356_12760 adenylate cyclase low > 104
Pseudomonas sp. RS175 0.55 PFR28_03748 Ribosomal large subunit pseudouridine synthase D 0.25 PFR28_04371 Adenylate cyclase low > 88
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_5127 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) 0.25 Pf6N2E2_4425 Adenylate cyclase (EC 4.6.1.1) — —
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_1493 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) 0.24 PfGW456L13_850 Adenylate cyclase (EC 4.6.1.1) — —
Pseudomonas stutzeri RCH2 0.54 Psest_0709 pseudouridine synthase, RluA family 0.24 Psest_3758 Adenylate cyclase low > 67
Marinobacter adhaerens HP15 0.52 HP15_527 pseudouridine synthase, RluA family 0.21 HP15_245 adenylate cyclase low > 73

Not shown: 59 genomes with orthologs for IAI46_03985 only; 1 genomes with orthologs for IAI46_00700 only