Conservation of cofitness between HSERO_RS23730 and HSERO_RS23930 in Herbaspirillum seropedicae SmR1

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS23730 MFS transporter 1.0 HSERO_RS23930 beta-D-glucoside glucohydrolase 0.43 9
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS26355 multidrug MFS transporter 0.65 RR42_RS26860 beta-D-glucoside glucohydrolase low > 128
Rahnella sp. WP5 0.50 EX31_RS24890 MFS transporter 0.59 EX31_RS08330 beta-glucosidase BglX low > 89
Klebsiella michiganensis M5al 0.49 BWI76_RS17965 MFS transporter 0.58 BWI76_RS19510 beta-glucosidase low > 92
Pseudomonas simiae WCS417 0.48 PS417_16685 multidrug MFS transporter 0.70 PS417_06840 beta-D-glucoside glucohydrolase low > 88
Escherichia coli ECOR38 0.48 HEPCGN_04875 yebQ Uncharacterized transporter YebQ 0.58 HEPCGN_02230 bglX beta-glucosidase BglX low > 87
Escherichia fergusonii Becca 0.48 EFB2_02173 Riboflavin transporter RibZ 0.58 EFB2_01723 Beta-xylosidase low > 86
Escherichia coli ECRC62 0.48 BNILDI_15780 yebQ Uncharacterized transporter YebQ 0.58 BNILDI_14145 bglX beta-glucosidase BglX low > 75
Escherichia coli ECRC102 0.48 NIAGMN_01585 yebQ Uncharacterized transporter YebQ 0.58 NIAGMN_21420 bglX beta-glucosidase BglX — —
Escherichia coli ECOR27 0.48 NOLOHH_16985 yebQ Uncharacterized transporter YebQ 0.58 NOLOHH_15195 bglX beta-glucosidase BglX low > 75
Escherichia coli ECRC100 0.48 OKFHMN_26475 yebQ Uncharacterized transporter YebQ 0.58 OKFHMN_23655 bglX beta-glucosidase BglX low > 80
Escherichia coli ECRC98 0.48 JDDGAC_01050 yebQ Uncharacterized transporter YebQ 0.58 JDDGAC_27610 bglX beta-glucosidase BglX low > 86
Escherichia coli ECRC99 0.48 KEDOAH_01630 yebQ Uncharacterized transporter YebQ 0.58 KEDOAH_04530 bglX beta-glucosidase BglX — —
Escherichia coli BL21 0.48 ECD_01799 putative transporter 0.58 ECD_02062 beta-D-glucoside glucohydrolase, periplasmic low > 61
Escherichia coli ECRC101 0.48 MCAODC_18930 yebQ Uncharacterized transporter YebQ 0.58 MCAODC_14705 bglX beta-glucosidase BglX low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_01903 Riboflavin transporter RibZ 0.58 OHPLBJKB_01578 Beta-glucosidase BoGH3B low > 73
Escherichia coli BW25113 0.48 b1828 b1828 putative transport protein (VIMSS) 0.58 b2132 bglX beta-D-glucoside glucohydrolase, periplasmic (NCBI) low > 76
Serratia liquefaciens MT49 0.48 IAI46_10815 MFS transporter 0.61 IAI46_06950 beta-glucosidase BglX low > 86
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS18720 MFS transporter 0.70 PFLU_RS06900 beta-glucosidase BglX low > 109
Pseudomonas fluorescens SBW25 0.47 PFLU_RS18720 MFS transporter 0.70 PFLU_RS06900 beta-glucosidase BglX low > 109
Escherichia coli Nissle 1917 0.47 ECOLIN_RS10180 MFS transporter 0.58 ECOLIN_RS12490 beta-glucosidase BglX — —
Erwinia tracheiphila SCR3 0.47 LU632_RS13235 MFS transporter 0.57 LU632_RS09325 bglX beta-glucosidase BglX low > 74
Enterobacter asburiae PDN3 0.47 EX28DRAFT_0728 Major Facilitator Superfamily 0.58 EX28DRAFT_0429 Beta-glucosidase-related glycosidases low > 76
Dickeya dianthicola ME23 0.47 DZA65_RS02230 MFS transporter 0.58 DZA65_RS09150 beta-glucosidase BglX low > 75
Dickeya dadantii 3937 0.46 DDA3937_RS02125 MFS transporter 0.58 DDA3937_RS08755 beta-glucosidase BglX low > 74
Pantoea sp. MT58 0.46 IAI47_08715 MFS transporter 0.57 IAI47_13370 beta-glucosidase BglX low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF2843 Putative transport protein 0.59 GFF3813 Periplasmic beta-glucosidase (EC 3.2.1.21) low > 78
Enterobacter sp. TBS_079 0.46 MPMX20_02735 Riboflavin transporter RibZ 0.58 MPMX20_03100 Beta-xylosidase low > 85
Dickeya dianthicola 67-19 0.46 HGI48_RS02095 MFS transporter 0.58 HGI48_RS08845 beta-glucosidase BglX low > 71
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS05645 MFS transporter 0.32 A4249_RS16135 glycoside hydrolase family 3 N-terminal domain-containing protein low > 48
Phocaeicola vulgatus CL09T03C04 0.42 HMPREF1058_RS11365 MFS transporter 0.25 HMPREF1058_RS08195 glycoside hydrolase family 3 C-terminal domain-containing protein low > 67
Phocaeicola dorei CL03T12C01 0.42 ABI39_RS05560 MFS transporter 0.42 ABI39_RS06000 beta-glucosidase BglX low > 72
Bacteroides thetaiotaomicron VPI-5482 0.41 BT2000 putative transport protein (NCBI ptt file) 0.41 BT1872 periplasmic beta-glucosidase precursor (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.41 BACOVA_01425 drug resistance MFS transporter, drug:H+ antiporter-2 family 0.42 BACOVA_02958 glycosyl hydrolase family 3 N-terminal domain protein low > 94
Variovorax sp. OAS795 0.37 ABID97_RS15870 MFS transporter 0.33 ABID97_RS18075 beta-glucosidase BglX low > 91
Variovorax sp. SCN45 0.37 GFF1386 Uncharacterized transporter YebQ, major facilitator superfamily (MFS) 0.33 GFF615 beta-glucosidase (EC 3.2.1.21) low > 127
Pseudomonas fluorescens FW300-N2E3 0.16 AO353_28490 MFS transporter 0.70 AO353_17375 beta-D-glucoside glucohydrolase low > 101
Pseudomonas fluorescens FW300-N1B4 0.16 Pf1N1B4_4234 putative transport protein 0.68 Pf1N1B4_3261 Periplasmic beta-glucosidase (EC 3.2.1.21) low > 87
Dyella japonica UNC79MFTsu3.2 0.15 ABZR86_RS07365 MFS transporter 0.16 ABZR86_RS15485 glycoside hydrolase family 3 C-terminal domain-containing protein low > 74

Not shown: 12 genomes with orthologs for HSERO_RS23730 only; 26 genomes with orthologs for HSERO_RS23930 only