Conservation of cofitness between HSERO_RS08125 and HSERO_RS23825 in Herbaspirillum seropedicae SmR1

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS08125 hypothetical protein 1.0 HSERO_RS23825 hypothetical protein 0.40 8
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS13025 hypothetical protein 0.21 RR42_RS09010 FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 128
Ralstonia solanacearum PSI07 0.58 RPSI07_RS17860 YncE family protein 0.25 RPSI07_RS16115 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
Ralstonia solanacearum GMI1000 0.58 RS_RS06275 YncE family protein 0.25 RS_RS08635 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS11025 YncE family protein 0.27 ABZR87_RS12805 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 80
Ralstonia solanacearum UW163 0.57 UW163_RS12955 hypothetical protein 0.24 UW163_RS14670 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS15495 hypothetical protein 0.24 RALBFv3_RS01360 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 76
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS12970 hypothetical protein 0.29 BPHYT_RS19575 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 109
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_00447 40-residue YVTN family beta-propeller repeat-containing protein 0.27 H281DRAFT_02360 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein low > 103
Paraburkholderia graminis OAS925 0.55 ABIE53_002811 YVTN family beta-propeller protein 0.28 ABIE53_000291 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein low > 113
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS05635 beta-propeller fold lactonase family protein 0.26 QEN71_RS29485 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 153
Variovorax sp. OAS795 0.47 ABID97_RS09905 YncE family protein 0.12 ABID97_RS15455 FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 91
Variovorax sp. SCN45 0.47 GFF3075 Surface antigen 0.14 GFF1245 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 127
Acidovorax sp. GW101-3H11 0.46 Ac3H11_4424 Surface antigen 0.14 Ac3H11_579 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 79
Castellaniella sp019104865 MT123 0.15 ABCV34_RS00435 YncE family protein 0.13 ABCV34_RS09580 FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 48
Pseudomonas putida KT2440 0.14 PP_5392 conserved hypothetical protein containing WD40/YVTN repeat domain 0.17 PP_1751 methyltransferase/FAD-dependent oxidoreductase low > 96
Pseudomonas fluorescens FW300-N2C3 0.12 AO356_28085 hypothetical protein 0.19 AO356_03570 FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 104
Pseudomonas stutzeri RCH2 0.12 Psest_2042 PQQ-dependent catabolism-associated beta-propeller protein 0.19 Psest_1634 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain low > 67
Pseudomonas fluorescens SBW25 0.10 PFLU_RS09360 beta-propeller fold lactonase family protein 0.16 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 109
Pseudomonas fluorescens SBW25-INTG 0.10 PFLU_RS09360 beta-propeller fold lactonase family protein 0.16 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 109

Not shown: 5 genomes with orthologs for HSERO_RS08125 only; 45 genomes with orthologs for HSERO_RS23825 only