| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS16870 | | D-alanyl-D-alanine carboxypeptidase | 1.0 | HSERO_RS23065 | | psensor histidine kinase | 0.25 | 19 |
| Ralstonia solanacearum PSI07 | 0.37 | RPSI07_RS21110 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | 0.32 | RPSI07_RS05350 | | two-component sensor histidine kinase | low | > 81 |
| Variovorax sp. SCN45 | 0.37 | GFF5516 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | 0.48 | GFF5988 | | Sensory histidine kinase BaeS | low | > 127 |
| Ralstonia solanacearum GMI1000 | 0.37 | RS_RS02925 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | 0.35 | RS_RS22735 | | two-component sensor histidine kinase | low | > 80 |
| Ralstonia solanacearum UW163 | 0.37 | UW163_RS01390 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | 0.31 | UW163_RS20880 | | two-component sensor histidine kinase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.37 | RALBFv3_RS12220 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | 0.31 | RALBFv3_RS18250 | | two-component sensor histidine kinase | low | > 76 |
| Ralstonia sp. UNC404CL21Col | 0.36 | ABZR87_RS08110 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | 0.36 | ABZR87_RS19180 | | ATP-binding protein | low | > 80 |
| Pseudomonas fluorescens SBW25-INTG | 0.35 | PFLU_RS22535 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | 0.47 | PFLU_RS20145 | | sensor histidine kinase efflux regulator BaeS | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.35 | PFLU_RS22535 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | 0.47 | PFLU_RS20145 | | sensor histidine kinase efflux regulator BaeS | low | > 109 |
| Pseudomonas simiae WCS417 | 0.35 | PS417_20920 | | D-alanyl-D-alanine carboxypeptidase | 0.47 | PS417_18295 | | histidine kinase | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.34 | AO356_02595 | | D-alanyl-D-alanine carboxypeptidase | 0.45 | AO356_00705 | | histidine kinase | low | > 104 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.34 | Psyr_2111 | | Peptidase S13, D-Ala-D-Ala carboxypeptidase C | 0.48 | Psyr_2867 | | ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.34 | Psyr_2111 | | Peptidase S13, D-Ala-D-Ala carboxypeptidase C | 0.48 | Psyr_2867 | | ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal | low | > 86 |
| Pseudomonas fluorescens FW300-N2E2 | 0.34 | Pf6N2E2_2344 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | 0.45 | Pf6N2E2_220 | | Sensory histidine kinase BaeS | low | > 103 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.32 | GFF2768 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | 0.24 | GFF3899 | | Sensory histidine kinase BaeS | low | > 90 |
| Castellaniella sp019104865 MT123 | 0.32 | ABCV34_RS15375 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | 0.34 | ABCV34_RS02925 | | sensor histidine kinase efflux regulator BaeS | low | > 48 |
| Erwinia tracheiphila SCR3 | 0.16 | LU632_RS21170 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | 0.38 | LU632_RS08675 | baeS | two-component system sensor histidine kinase BaeS | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.15 | HER17_RS18335 | | serine-type D-Ala-D-Ala carboxypeptidase | 0.38 | HER17_RS06305 | | two-component system sensor histidine kinase BaeS | low | > 75 |
| Dickeya dianthicola ME23 | 0.14 | DZA65_RS03175 | | serine-type D-Ala-D-Ala carboxypeptidase | 0.37 | DZA65_RS16180 | | two-component system sensor histidine kinase BaeS | low | > 75 |
| Dickeya dadantii 3937 | 0.14 | DDA3937_RS03010 | | serine-type D-Ala-D-Ala carboxypeptidase | 0.37 | DDA3937_RS15280 | | two-component system sensor histidine kinase BaeS | low | > 74 |
| Enterobacter asburiae PDN3 | 0.14 | EX28DRAFT_3234 | | D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family | 0.38 | EX28DRAFT_0480 | | Signal transduction histidine kinase | low | > 76 |
| Dickeya dianthicola 67-19 | 0.14 | HGI48_RS03180 | | serine-type D-Ala-D-Ala carboxypeptidase | 0.37 | HGI48_RS15360 | | two-component system sensor histidine kinase BaeS | low | > 71 |
| Enterobacter sp. TBS_079 | 0.14 | MPMX20_04086 | | D-alanyl-D-alanine carboxypeptidase DacB | 0.38 | MPMX20_03064 | | Signal transduction histidine-protein kinase BaeS | low | > 85 |
| Rahnella sp. WP5 | 0.14 | EX31_RS08600 | | serine-type D-Ala-D-Ala carboxypeptidase | 0.40 | EX31_RS20310 | | two-component system sensor histidine kinase BaeS | low | > 89 |
| Klebsiella michiganensis M5al | 0.14 | BWI76_RS25165 | | serine-type D-Ala-D-Ala carboxypeptidase | 0.35 | BWI76_RS19270 | | two-component sensor histidine kinase | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.13 | GFF2924 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | 0.38 | GFF3851 | | Sensory histidine kinase BaeS | low | > 78 |
| Escherichia coli BL21 | 0.13 | ECD_03047 | | D-alanyl-D-alanine carboxypeptidase | 0.38 | ECD_01983 | | sensory histidine kinase in two-component regulatory system with BaeR | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.13 | OHPLBJKB_00518 | | D-alanyl-D-alanine carboxypeptidase DacB | 0.38 | OHPLBJKB_01626 | | Signal transduction histidine-protein kinase BaeS | low | > 73 |
| Escherichia coli ECOR27 | 0.13 | NOLOHH_09840 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | 0.38 | NOLOHH_15525 | baeS | two-component system sensor histidine kinase BaeS | low | > 75 |
| Escherichia coli BW25113 | 0.13 | b3182 | dacB | D-alanyl-D-alanine carboxypeptidase (NCBI) | 0.38 | b2078 | baeS | sensory histidine kinase in two-component regulatory system with BaeR (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.13 | HEPCGN_16915 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | 0.38 | HEPCGN_02870 | baeS | two-component system sensor histidine kinase BaeS | low | > 87 |
| Escherichia coli Nissle 1917 | 0.13 | ECOLIN_RS18325 | | serine-type D-Ala-D-Ala carboxypeptidase | 0.38 | ECOLIN_RS12215 | | two-component system sensor histidine kinase BaeS | — | — |
| Escherichia fergusonii Becca | 0.13 | EFB2_00641 | | D-alanyl-D-alanine carboxypeptidase DacB | 0.38 | EFB2_01777 | | Signal transduction histidine-protein kinase BaeS | low | > 86 |
| Escherichia coli ECRC62 | 0.13 | BNILDI_01695 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | 0.38 | BNILDI_14440 | baeS | two-component system sensor histidine kinase BaeS | low | > 75 |
| Escherichia coli ECRC99 | 0.13 | KEDOAH_10110 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | 0.38 | KEDOAH_03970 | baeS | two-component system sensor histidine kinase BaeS | — | — |
| Escherichia coli ECRC98 | 0.13 | JDDGAC_21665 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | 0.38 | JDDGAC_28290 | baeS | two-component system sensor histidine kinase BaeS | low | > 86 |
| Escherichia coli ECRC101 | 0.13 | MCAODC_08560 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | 0.38 | MCAODC_20760 | baeS | two-component system sensor histidine kinase BaeS | low | > 87 |
| Escherichia coli ECRC100 | 0.13 | OKFHMN_18040 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | 0.38 | OKFHMN_24180 | baeS | two-component system sensor histidine kinase BaeS | low | > 80 |
| Escherichia coli ECRC102 | 0.13 | NIAGMN_15800 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | 0.38 | NIAGMN_22125 | baeS | two-component system sensor histidine kinase BaeS | — | — |
| Serratia liquefaciens MT49 | 0.13 | IAI46_01875 | | serine-type D-Ala-D-Ala carboxypeptidase | 0.39 | IAI46_18990 | | two-component system sensor histidine kinase BaeS | low | > 86 |
Not shown: 30 genomes with orthologs for HSERO_RS16870 only; 3 genomes with orthologs for HSERO_RS23065 only