Conservation of cofitness between HSERO_RS11215 and HSERO_RS17220 in Herbaspirillum seropedicae SmR1

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS11215 methionine sulfoxide reductase B 1.0 HSERO_RS17220 membrane protein 0.31 14
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_19155 peptide methionine sulfoxide reductase 0.54 AO353_06585 hypothetical protein low > 101
Acinetobacter radioresistens SK82 0.60 MPMX26_01870 Peptide methionine sulfoxide reductase MsrB 0.56 MPMX26_00073 Protein DedA low > 36
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS11250 peptide-methionine (R)-S-oxide reductase MsrB 0.16 ABZR86_RS12835 DedA family protein low > 74
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_2445 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.55 Pf6N2E2_4974 DedA protein low > 103
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_260 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.48 Pf1N1B4_2668 DedA protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_03085 peptide methionine sulfoxide reductase 0.53 AO356_15200 hypothetical protein low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_3614 Protein of unknown function DUF25 0.49 Psyr_0626 DedA low > 86
Pseudomonas putida KT2440 0.59 PP_1873 Peptide methionine sulfoxide reductase MsrB 0.50 PP_0540 conserved inner membrane protein low > 96
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_3614 Protein of unknown function DUF25 0.49 Psyr_0626 DedA low > 86
Variovorax sp. SCN45 0.59 GFF1329 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) 0.51 GFF4801 DedA protein low > 127
Variovorax sp. OAS795 0.59 ABID97_RS15695 peptide-methionine (R)-S-oxide reductase MsrB 0.52 ABID97_RS20305 DedA family protein — —
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_2253 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.52 PfGW456L13_1337 DedA protein low > 87
Pseudomonas sp. RS175 0.58 PFR28_00985 Peptide methionine sulfoxide reductase MsrB 0.54 PFR28_03891 Protein DedA low > 88
Pseudomonas fluorescens SBW25 0.57 PFLU_RS08515 peptide-methionine (R)-S-oxide reductase MsrB 0.54 PFLU_RS26770 DedA family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS08515 peptide-methionine (R)-S-oxide reductase MsrB 0.54 PFLU_RS26770 DedA family protein low > 109
Pseudomonas simiae WCS417 0.57 PS417_08565 peptide methionine sulfoxide reductase 0.52 PS417_24835 hypothetical protein low > 88
Pseudomonas sp. S08-1 0.56 OH686_22580 Peptide-methionine (R)-S-oxide reductase MsrB 0.69 OH686_14535 DedA protein low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF4579 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.53 GFF5484 DedA protein — —
Enterobacter asburiae PDN3 0.52 EX28DRAFT_1772 methionine-R-sulfoxide reductase 0.70 EX28DRAFT_0287 Uncharacterized membrane-associated protein low > 76
Enterobacter sp. TBS_079 0.52 MPMX20_01845 Peptide methionine sulfoxide reductase MsrB 0.69 MPMX20_03252 Protein DedA low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_01954 Peptide methionine sulfoxide reductase MsrB 0.68 OHPLBJKB_01388 Protein DedA low > 73
Escherichia coli ECRC62 0.52 BNILDI_16050 msrB Peptide methionine sulfoxide reductase MsrB 0.66 BNILDI_13230 DedA family inner membrane protein low > 75
Escherichia fergusonii Becca 0.52 EFB2_02216 Peptide methionine sulfoxide reductase MsrB 0.67 EFB2_01541 Protein DedA low > 86
Escherichia coli ECOR27 0.52 NOLOHH_17265 msrB Peptide methionine sulfoxide reductase MsrB 0.68 NOLOHH_14310 Protein DedA low > 75
Escherichia coli ECRC100 0.52 OKFHMN_26735 msrB Peptide methionine sulfoxide reductase MsrB 0.68 OKFHMN_22675 Protein DedA low > 80
Escherichia coli ECRC98 0.52 JDDGAC_01310 msrB Peptide methionine sulfoxide reductase MsrB 0.68 JDDGAC_26635 Protein DedA low > 86
Escherichia coli ECOR38 0.52 HEPCGN_05125 msrB Peptide methionine sulfoxide reductase MsrB 0.66 HEPCGN_21880 DedA family inner membrane protein low > 87
Escherichia coli BL21 0.52 ECD_01747 methionine sulfoxide reductase B 0.68 ECD_02242 DedA family inner membrane protein low > 61
Escherichia coli ECRC101 0.52 MCAODC_18675 msrB Peptide methionine sulfoxide reductase MsrB 0.68 MCAODC_13715 Protein DedA low > 87
Escherichia coli Nissle 1917 0.52 ECOLIN_RS09915 peptide-methionine (R)-S-oxide reductase MsrB 0.67 ECOLIN_RS13430 DedA family protein — —
Escherichia coli ECRC99 0.52 KEDOAH_01375 msrB Peptide methionine sulfoxide reductase MsrB 0.68 KEDOAH_05520 Protein DedA — —
Escherichia coli ECRC102 0.52 NIAGMN_01330 msrB Peptide methionine sulfoxide reductase MsrB 0.68 NIAGMN_20450 Protein DedA — —
Escherichia coli BW25113 0.52 b1778 yeaA methionine sulfoxide reductase B (NCBI) 0.68 b2317 dedA conserved inner membrane protein (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF3479 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.68 GFF1933 DedA protein low > 78
Rahnella sp. WP5 0.50 EX31_RS06285 peptide-methionine (R)-S-oxide reductase MsrB 0.66 EX31_RS19595 DedA family protein low > 89
Klebsiella michiganensis M5al 0.49 BWI76_RS11515 peptide-methionine (R)-S-oxide reductase 0.70 BWI76_RS20375 membrane protein low > 92
Erwinia tracheiphila SCR3 0.49 LU632_RS12990 msrB peptide-methionine (R)-S-oxide reductase MsrB 0.65 LU632_RS07830 DedA family protein low > 74
Serratia liquefaciens MT49 0.49 IAI46_14350 peptide-methionine (R)-S-oxide reductase MsrB 0.69 IAI46_17835 DedA family protein low > 86
Pantoea sp. MT58 0.48 IAI47_08950 peptide-methionine (R)-S-oxide reductase MsrB 0.64 IAI47_06250 DedA family protein low > 76
Dickeya dianthicola ME23 0.45 DZA65_RS10755 peptide-methionine (R)-S-oxide reductase MsrB 0.67 DZA65_RS15365 DedA family protein low > 75
Dickeya dianthicola 67-19 0.45 HGI48_RS10280 peptide-methionine (R)-S-oxide reductase MsrB 0.67 HGI48_RS14430 DedA family protein low > 71
Dickeya dadantii 3937 0.44 DDA3937_RS10270 peptide-methionine (R)-S-oxide reductase MsrB 0.69 DDA3937_RS14460 DedA family protein low > 74

Not shown: 33 genomes with orthologs for HSERO_RS11215 only; 8 genomes with orthologs for HSERO_RS17220 only