Conservation of cofitness between HSERO_RS05425 and HSERO_RS12955 in Herbaspirillum seropedicae SmR1

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS05425 decarboxylase 1.0 HSERO_RS12955 short-chain dehydrogenase 0.31 15
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS22440 DNA-binding protein 0.32 BPHYT_RS16940 short-chain dehydrogenase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_03509 transcriptional regulator, GntR family 0.48 H281DRAFT_03713 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family low > 103
Ralstonia solanacearum GMI1000 0.48 RS_RS00150 PLP-dependent aminotransferase family protein 0.31 RS_RS13775 short-chain dehydrogenase low > 80
Ralstonia solanacearum PSI07 0.48 RPSI07_RS23800 PLP-dependent aminotransferase family protein 0.32 RPSI07_RS11415 short-chain dehydrogenase low > 81
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS05185 PLP-dependent aminotransferase family protein 0.32 ABZR87_RS01455 SDR family oxidoreductase low > 80
Castellaniella sp019104865 MT123 0.45 ABCV34_RS01775 PLP-dependent aminotransferase family protein 0.34 ABCV34_RS04830 SDR family oxidoreductase low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF2040 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) 0.30 GFF5695 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) low > 90
Azospirillum sp. SherDot2 0.34 MPMX19_03847 HTH-type transcriptional regulatory protein GabR 0.56 MPMX19_01147 A-factor type gamma-butyrolactone 1'-reductase (1S-forming) low > 112
Variovorax sp. SCN45 0.31 GFF1662 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) 0.33 GFF4358 Oxidoreductase, short-chain dehydrogenase/reductase family low > 127
Rhodopseudomonas palustris CGA009 0.30 TX73_007155 PLP-dependent aminotransferase family protein 0.30 TX73_016995 SDR family NAD(P)-dependent oxidoreductase low > 86
Rhodospirillum rubrum S1H 0.28 Rru_A1143 regulatory protein GntR (NCBI) 0.30 Rru_A3017 Short-chain dehydrogenase/reductase SDR (NCBI) low > 58
Azospirillum brasilense Sp245 0.28 AZOBR_RS22530 transcriptional regulator 0.29 AZOBR_RS25730 3-ketoacyl-ACP reductase low > 97
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_4288 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) 0.30 Pf6N2E2_1004 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) low > 103
Desulfovibrio vulgaris Hildenborough JW710 0.24 DVU2086 transcriptional regulator, GntR family (TIGR) 0.28 DVU3137 fabG oxidoreductase, short chain dehydrogenase/reductase family (TIGR) low > 55
Rhizobium sp. OAE497 0.24 ABIE40_RS04930 PLP-dependent aminotransferase family protein 0.50 ABIE40_RS01520 SDR family oxidoreductase low > 107
Sphingomonas koreensis DSMZ 15582 0.16 Ga0059261_3317 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 0.43 Ga0059261_0812 Short-chain alcohol dehydrogenase of unknown specificity low > 68
Sinorhizobium meliloti 1021 0.15 SM_b21525 transcriptional regulator 0.51 SMc00372 short chain dehydrogenase low > 103

Not shown: 48 genomes with orthologs for HSERO_RS05425 only; 7 genomes with orthologs for HSERO_RS12955 only