Conservation of cofitness between HSERO_RS21375 and HSERO_RS12085 in Herbaspirillum seropedicae SmR1

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS21375 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1.0 HSERO_RS12085 RNA polymerase sigma-E factor protein 0.29 14
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS19370 peptide chain release factor N(5)-glutamine methyltransferase 0.35 ABZR86_RS04785 sigma-70 family RNA polymerase sigma factor
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_02015 Release factor glutamine methyltransferase 0.34 OKGIIK_14780 RNA polymerase subunit sigma-70
Enterobacter asburiae PDN3 0.41 EX28DRAFT_0831 protein-(glutamine-N5) methyltransferase, release factor-specific 0.22 EX28DRAFT_2390 RNA polymerase sigma factor, sigma-70 family
Xanthomonas campestris pv. campestris strain 8004 0.40 Xcc-8004.4220.1 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 0.31 Xcc-8004.3183.1 RNA polymerase sigma factor RpoE
Pseudomonas sp. S08-1 0.40 OH686_07905 protein-(glutamine-N5) methyltransferase, release factor-specific 0.26 OH686_11525 hypothetical protein low > 80
Alteromonas macleodii MIT1002 0.39 MIT1002_01515 Release factor glutamine methyltransferase 0.19 MIT1002_02682 Sigma-W factor low > 70
Rhodanobacter denitrificans MT42 0.39 LRK55_RS12145 peptide chain release factor N(5)-glutamine methyltransferase 0.34 LRK55_RS04975 sigma-70 family RNA polymerase sigma factor
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS12410 peptide chain release factor N(5)-glutamine methyltransferase 0.34 LRK54_RS05195 sigma-70 family RNA polymerase sigma factor
Shewanella oneidensis MR-1 0.37 SO3832 hemK family protein (NCBI ptt file) 0.20 SO1986 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) low > 76
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_00918 peptide release factor-glutamine N5-methyltransferase 0.20 CCNA_00685 RNA polymerase sigma factor
Caulobacter crescentus NA1000 0.30 CCNA_00918 peptide release factor-glutamine N5-methyltransferase 0.20 CCNA_00685 RNA polymerase sigma factor
Rhodopseudomonas palustris CGA009 0.28 TX73_003140 peptide chain release factor N(5)-glutamine methyltransferase 0.28 TX73_009355 sigma-70 family RNA polymerase sigma factor
Brevundimonas sp. GW460-12-10-14-LB2 0.27 A4249_RS11000 peptide chain release factor N(5)-glutamine methyltransferase 0.22 A4249_RS05845 sigma-70 family RNA polymerase sigma factor
Azospirillum brasilense Sp245 0.27 AZOBR_RS18930 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 0.23 AZOBR_RS00810 RNA polymerase sigma factor RpoE
Bacteroides stercoris CC31F 0.25 HMPREF1181_RS03390 peptide chain release factor N(5)-glutamine methyltransferase 0.18 HMPREF1181_RS04900 RNA polymerase sigma-70 factor low > 56
Azospirillum sp. SherDot2 0.25 MPMX19_02446 Release factor glutamine methyltransferase 0.23 MPMX19_05229 ECF RNA polymerase sigma factor RpoE
Rhizobium sp. OAE497 0.25 ABIE40_RS17290 peptide chain release factor N(5)-glutamine methyltransferase 0.24 ABIE40_RS26955 sigma-70 family RNA polymerase sigma factor low > 107
Sphingomonas koreensis DSMZ 15582 0.24 Ga0059261_1601 protein-(glutamine-N5) methyltransferase, release factor-specific 0.17 Ga0059261_1715 RNA polymerase sigma factor, sigma-70 family low > 68
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_17895 protein-(glutamine-N5) methyltransferase, release factor-specific 0.21 CA264_11515 RNA polymerase sigma-70 factor
Phocaeicola dorei CL03T12C01 0.24 ABI39_RS07070 peptide chain release factor N(5)-glutamine methyltransferase 0.20 ABI39_RS08655 RNA polymerase sigma-70 factor low > 72
Agrobacterium fabrum C58 0.24 Atu4175 protoporphyrinogen oxidase 0.20 Atu1982 sigma factor
Bacteroides thetaiotaomicron VPI-5482 0.24 BT3729 putative protoporphyrinogen oxidase (NCBI ptt file) 0.19 BT3190 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS09610 peptide chain release factor N(5)-glutamine methyltransferase 0.19 HMPREF1058_RS13420 RNA polymerase sigma-70 factor low > 67
Parabacteroides merdae CL09T00C40 0.22 HMPREF1078_RS11290 peptide chain release factor N(5)-glutamine methyltransferase 0.18 HMPREF1078_RS13360 RNA polymerase sigma-70 factor low > 61
Bacteroides ovatus ATCC 8483 0.21 BACOVA_03547 protein-(glutamine-N5) methyltransferase, release factor-specific 0.21 BACOVA_05174 RNA polymerase sigma-70 factor low > 94

Not shown: 67 genomes with orthologs for HSERO_RS21375 only; 5 genomes with orthologs for HSERO_RS12085 only