Conservation of cofitness between HSERO_RS06810 and HSERO_RS10200 in Herbaspirillum seropedicae SmR1

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS06810 hemolysin D 1.0 HSERO_RS10200 flagellar basal body rod protein FlgF 0.34 14
Xanthomonas campestris pv. campestris strain 8004 0.61 Xcc-8004.1793.1 RND efflux system, membrane fusion protein CmeA 0.38 Xcc-8004.2782.1 Flagellar basal-body rod protein FlgF low > 74
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS18280 efflux RND transporter periplasmic adaptor subunit 0.46 ABZR86_RS20095 flagellar basal-body rod protein FlgF low > 74
Ralstonia solanacearum UW163 0.58 UW163_RS19385 efflux RND transporter periplasmic adaptor subunit 0.54 UW163_RS17465 flagellar basal-body rod protein FlgF — —
Ralstonia solanacearum IBSBF1503 0.58 RALBFv3_RS19790 efflux RND transporter periplasmic adaptor subunit 0.54 RALBFv3_RS21720 flagellar basal-body rod protein FlgF low > 76
Ralstonia solanacearum PSI07 0.57 RPSI07_RS03395 efflux RND transporter periplasmic adaptor subunit 0.55 RPSI07_RS01410 flagellar basal-body rod protein FlgF low > 81
Ralstonia solanacearum GMI1000 0.57 RS_RS21035 efflux RND transporter periplasmic adaptor subunit 0.54 RS_RS18815 flagellar basal-body rod protein FlgF low > 80
Serratia liquefaciens MT49 0.49 IAI46_05190 multidrug efflux RND transporter periplasmic adaptor subunit SdeX 0.49 IAI46_15940 flagellar basal body rod protein FlgF low > 86
Pantoea sp. MT58 0.48 IAI47_14510 efflux RND transporter periplasmic adaptor subunit 0.48 IAI47_12145 flagellar basal body rod protein FlgF low > 76
Escherichia fergusonii Becca 0.48 EFB2_00559 Multidrug export protein AcrE 0.48 EFB2_02897 Flagellar basal-body rod protein FlgF low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_4007 Secretion protein HlyD 0.46 Psyr_3476 Flagellar basal body rod protein:Protein of unknown function DUF1078 low > 86
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_4007 Secretion protein HlyD 0.46 Psyr_3476 Flagellar basal body rod protein:Protein of unknown function DUF1078 low > 86
Erwinia tracheiphila SCR3 0.47 LU632_RS18180 efflux RND transporter periplasmic adaptor subunit 0.48 LU632_RS10415 flagellar basal body rod protein FlgF — —
Dickeya dadantii 3937 0.47 DDA3937_RS05740 efflux RND transporter periplasmic adaptor subunit 0.48 DDA3937_RS13460 flagellar basal body rod protein FlgF low > 74
Escherichia coli ECOR38 0.47 HEPCGN_16480 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.47 HEPCGN_23835 flgF flagellar basal-body rod protein FlgF low > 87
Escherichia coli Nissle 1917 0.47 ECOLIN_RS18750 multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.48 ECOLIN_RS06235 flagellar basal-body rod protein FlgF low > 55
Enterobacter sp. TBS_079 0.47 MPMX20_01065 Multidrug efflux pump subunit AcrA 0.49 MPMX20_01756 Flagellar basal-body rod protein FlgF low > 85
Rahnella sp. WP5 0.47 EX31_RS22475 efflux RND transporter periplasmic adaptor subunit 0.44 EX31_RS11295 flagellar basal body rod protein FlgF 0.49 23
Escherichia coli ECRC99 0.46 KEDOAH_10490 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.48 KEDOAH_24100 flgF flagellar basal-body rod protein FlgF — —
Escherichia coli ECRC98 0.46 JDDGAC_21285 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.48 JDDGAC_07315 flgF flagellar basal-body rod protein FlgF low > 86
Escherichia coli ECOR27 0.46 NOLOHH_09445 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.47 NOLOHH_21185 flgF flagellar basal-body rod protein FlgF low > 75
Escherichia coli BW25113 0.46 b3265 acrE cytoplasmic membrane lipoprotein (NCBI) 0.48 b1077 flgF flagellar component of cell-proximal portion of basal-body rod (NCBI) low > 76
Escherichia coli ECRC100 0.46 OKFHMN_17660 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.48 OKFHMN_03655 flgF flagellar basal-body rod protein FlgF low > 80
Escherichia coli ECRC101 0.46 MCAODC_08180 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.48 MCAODC_23015 flgF flagellar basal-body rod protein FlgF low > 87
Escherichia coli ECRC62 0.46 BNILDI_02075 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.47 BNILDI_19345 flgF flagellar basal-body rod protein FlgF low > 75
Escherichia coli ECRC102 0.46 NIAGMN_15420 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.48 NIAGMN_24175 flgF flagellar basal-body rod protein FlgF — —
Escherichia coli BL21 0.46 ECD_03123 cytoplasmic membrane lipoprotein 0.48 ECD_01073 flagellar component of cell-proximal portion of basal-body rod — —
Pseudomonas fluorescens SBW25 0.46 PFLU_RS06810 efflux RND transporter periplasmic adaptor subunit 0.44 PFLU_RS21860 flagellar basal body rod protein FlgF 0.57 108
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS06810 efflux RND transporter periplasmic adaptor subunit 0.44 PFLU_RS21860 flagellar basal body rod protein FlgF low > 109
Pectobacterium carotovorum WPP14 0.46 HER17_RS15735 efflux RND transporter periplasmic adaptor subunit 0.51 HER17_RS08185 flagellar basal body rod protein FlgF low > 75
Dickeya dianthicola ME23 0.46 DZA65_RS06120 efflux RND transporter periplasmic adaptor subunit 0.47 DZA65_RS13990 flagellar basal body rod protein FlgF low > 75
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2495 RND family efflux transporter, MFP subunit 0.48 EX28DRAFT_1855 flagellar hook-basal body protein low > 76
Dickeya dianthicola 67-19 0.46 HGI48_RS05795 efflux RND transporter periplasmic adaptor subunit 0.47 HGI48_RS13505 flagellar basal body rod protein FlgF low > 71
Pseudomonas sp. RS175 0.45 PFR28_00632 putative efflux pump periplasmic linker TtgA 0.43 PFR28_00804 Flagellar basal-body rod protein FlgF low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF2117 RND efflux system, membrane fusion protein CmeA 0.47 GFF3358 Flagellar basal-body rod protein FlgF low > 78
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS34600 hemolysin D 0.56 BPHYT_RS18875 flagellar basal body rod protein FlgF low > 109
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_0560 RND family efflux transporter, MFP subunit 0.36 Ga0059261_2093 flagellar basal-body rod protein FlgF low > 68

Not shown: 3 genomes with orthologs for HSERO_RS06810 only; 40 genomes with orthologs for HSERO_RS10200 only