Conservation of cofitness between HSERO_RS09540 and HSERO_RS07545 in Herbaspirillum seropedicae SmR1

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS09540 diguanylate cyclase 1.0 HSERO_RS07545 2-dehydro-3-deoxygluconokinase 0.24 18
Castellaniella sp019104865 MT123 0.39 ABCV34_RS04665 GGDEF domain-containing protein 0.52 ABCV34_RS08620 sugar kinase low > 48
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS02060 diguanylate cyclase 0.61 BPHYT_RS11300 2-dehydro-3-deoxygluconokinase — —
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_02115 diguanylate cyclase/phosphodiesterase 0.61 H281DRAFT_05211 2-dehydro-3-deoxygluconokinase low > 103
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS00990 phosphodiesterase 0.60 QEN71_RS07255 sugar kinase low > 153
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_4208 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 0.48 PfGW456L13_2950 2-ketogluconate kinase (EC 2.7.1.13) low > 87
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_02445 diguanylate phosphodiesterase 0.48 AO353_26875 2-dehydro-3-deoxygluconokinase low > 101
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_3740 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 0.52 Pf1N1B4_4765 2-ketogluconate kinase (EC 2.7.1.13) low > 87
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS35575 diguanylate cyclase 0.53 RR42_RS09470 2-dehydro-3-deoxygluconokinase low > 128
Pseudomonas simiae WCS417 0.35 PS417_09320 diguanylate phosphodiesterase 0.53 PS417_12565 2-dehydro-3-deoxygluconokinase low > 88
Pseudomonas fluorescens SBW25 0.35 PFLU_RS09975 EAL and GGDEF domain-containing protein 0.52 PFLU_RS13250 sugar kinase low > 109
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_5779 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 0.54 Pf6N2E2_629 2-ketogluconate kinase (EC 2.7.1.13) low > 103
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS09975 EAL and GGDEF domain-containing protein 0.52 PFLU_RS13250 sugar kinase low > 109
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_19330 diguanylate phosphodiesterase 0.53 AO356_24685 2-dehydro-3-deoxygluconokinase low > 104
Pseudomonas sp. RS175 0.35 PFR28_03170 hypothetical protein 0.53 PFR28_01598 2-dehydro-3-deoxygluconokinase low > 88
Ralstonia sp. UNC404CL21Col 0.34 ABZR87_RS22805 phosphodiesterase 0.57 ABZR87_RS09020 sugar kinase low > 80
Variovorax sp. SCN45 0.33 GFF6204 Diguanylate cyclase/phosphodiesterase domain 2 (EAL) 0.57 GFF2716 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) low > 127
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS13860 phosphodiesterase 0.12 LRK54_RS05060 carbohydrate kinase low > 59
Rhodanobacter denitrificans MT42 0.32 LRK55_RS13575 GGDEF domain-containing protein 0.12 LRK55_RS04840 carbohydrate kinase low > 63
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_13885 eAL phosphodiesterase 0.13 OKGIIK_01685 rbsK carbohydrate kinase low > 52

Not shown: 15 genomes with orthologs for HSERO_RS09540 only; 35 genomes with orthologs for HSERO_RS07545 only