Conservation of cofitness between HSERO_RS05945 and HSERO_RS07215 in Herbaspirillum seropedicae SmR1

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS05945 hypothetical protein 1.0 HSERO_RS07215 preprotein translocase 0.31 1
Dechlorosoma suillum PS 0.53 Dsui_1537 DNA repair protein radc 0.19 Dsui_2704 yecA family protein low > 51
Pseudomonas fluorescens SBW25 0.46 PFLU_RS29445 JAB domain-containing protein 0.17 PFLU_RS13545 YecA family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS29445 JAB domain-containing protein 0.17 PFLU_RS13545 YecA family protein low > 109
Pseudomonas simiae WCS417 0.45 PS417_27770 hypothetical protein 0.17 PS417_12860 hypothetical protein — —
Rhodanobacter denitrificans FW104-10B01 0.43 LRK54_RS09165 DNA repair protein RadC 0.20 LRK54_RS08630 YecA family protein low > 59
Rhodanobacter denitrificans MT42 0.43 LRK55_RS08695 DNA repair protein RadC 0.20 LRK55_RS08395 YecA family protein low > 63
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS15615 DNA repair protein RadC 0.19 ABZR86_RS14925 YecA family protein low > 74
Acidovorax sp. GW101-3H11 0.40 Ac3H11_1774 DNA repair protein RadC 0.13 Ac3H11_735 FIG00581584: hypothetical protein low > 79
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_15660 radC DNA repair protein RadC 0.20 OKGIIK_15395 yecA YecA family protein low > 52
Pantoea sp. MT58 0.39 IAI47_00620 DNA repair protein RadC 0.24 IAI47_16480 YecA family protein low > 76
Klebsiella michiganensis M5al 0.38 BWI76_RS27365 hypothetical protein 0.27 BWI76_RS18300 hypothetical protein low > 92
Enterobacter sp. TBS_079 0.38 MPMX20_00097 hypothetical protein 0.23 MPMX20_02819 hypothetical protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF371 DNA repair protein RadC 0.24 GFF1684 FIG00637942: hypothetical protein low > 78
Escherichia coli BL21 0.38 ECD_03495 UPF0758 family protein 0.25 ECD_01876 UPF0149 family protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_00064 hypothetical protein 0.25 OHPLBJKB_01821 hypothetical protein low > 73
Enterobacter asburiae PDN3 0.38 EX28DRAFT_3888 DNA repair protein radc 0.23 EX28DRAFT_0644 yecA family protein low > 76
Escherichia coli ECOR27 0.38 NOLOHH_07500 radC DNA repair protein RadC 0.25 NOLOHH_16470 yecA UPF0149 family protein YecA low > 75
Escherichia coli ECRC62 0.38 BNILDI_04015 radC DNA repair protein RadC 0.25 BNILDI_15260 yecA UPF0149 family protein YecA low > 75
Escherichia coli ECOR38 0.37 HEPCGN_14445 radC DNA repair protein RadC 0.26 HEPCGN_04450 yecA UPF0149 family protein YecA low > 87
Escherichia fergusonii Becca 0.37 EFB2_00175 hypothetical protein 0.26 EFB2_02038 hypothetical protein low > 86
Escherichia coli BW25113 0.37 b3638 radC DNA repair protein (VIMSS) 0.25 b1908 yecA conserved metal-binding protein (NCBI) low > 76
Escherichia coli ECRC100 0.37 OKFHMN_15620 radC DNA repair protein RadC 0.26 OKFHMN_26030 yecA UPF0149 family protein YecA low > 80
Escherichia coli ECRC99 0.37 KEDOAH_12530 radC DNA repair protein RadC 0.26 KEDOAH_02075 yecA UPF0149 family protein YecA — —
Escherichia coli Nissle 1917 0.37 ECOLIN_RS20730 DNA repair protein RadC 0.26 ECOLIN_RS10870 UPF0149 family protein YecA — —
Escherichia coli ECRC98 0.37 JDDGAC_19245 radC DNA repair protein RadC 0.26 JDDGAC_00605 yecA UPF0149 family protein YecA low > 86
Escherichia coli ECRC102 0.37 NIAGMN_13380 radC DNA repair protein RadC 0.26 NIAGMN_02035 yecA UPF0149 family protein YecA — —
Escherichia coli ECRC101 0.37 MCAODC_06130 radC DNA repair protein RadC 0.26 MCAODC_19375 yecA UPF0149 family protein YecA low > 87
Erwinia tracheiphila SCR3 0.36 LU632_RS21995 radC DNA repair protein RadC 0.16 LU632_RS02255 UPF0149 family protein low > 74
Lysobacter sp. OAE881 0.35 ABIE51_RS00095 DNA repair protein RadC 0.18 ABIE51_RS00535 UPF0149 family protein low > 62
Rhodopseudomonas palustris CGA009 0.28 TX73_002000 DNA repair protein RadC 0.19 TX73_011160 UPF0149 family protein low > 86

Not shown: 61 genomes with orthologs for HSERO_RS05945 only; 0 genomes with orthologs for HSERO_RS07215 only