Conservation of cofitness between HSERO_RS23005 and HSERO_RS03540 in Herbaspirillum seropedicae SmR1

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS23005 glutathione S-transferase 1.0 HSERO_RS03540 dimethyladenosine transferase 0.41 5
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS34085 glutathione S-transferase 0.56 RR42_RS02785 dimethyladenosine transferase low > 128
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS13620 glutathione transferase 0.49 QEN71_RS02130 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 153
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS32970 glutathione S-transferase 0.51 BPHYT_RS03305 ribosomal RNA small subunit methyltransferase A — —
Paraburkholderia graminis OAS925 0.60 ABIE53_002560 glutathione S-transferase 0.51 ABIE53_000800 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase low > 113
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_4107 Probable glutathione S-transferase (EC 2.5.1.18), YfcF homolog 0.45 Pf1N1B4_2528 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) — —
Variovorax sp. SCN45 0.56 GFF2015 Probable glutathione S-transferase (EC 2.5.1.18), YfcF homolog 0.48 GFF3251 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) 0.53 18
Serratia liquefaciens MT49 0.55 IAI46_22150 glutathione transferase 0.46 IAI46_03245 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Klebsiella michiganensis M5al 0.55 BWI76_RS20285 glutathione S-transferase 0.48 BWI76_RS04520 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase — —
Pseudomonas simiae WCS417 0.55 PS417_15405 glutathione S-transferase 0.46 PS417_25810 ribosomal RNA small subunit methyltransferase A — —
Pseudomonas fluorescens SBW25 0.55 PFLU_RS17375 glutathione transferase 0.45 PFLU_RS27465 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 109
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS17375 glutathione transferase 0.45 PFLU_RS27465 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 109
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF1912 Probable glutathione S-transferase (EC 2.5.1.18), YfcF homolog 0.48 GFF190 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) low > 78
Escherichia coli ECOR38 0.54 HEPCGN_21975 yfcF glutathione transferase 0.48 HEPCGN_08825 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_01404 Glutathione S-transferase YfcF 0.48 OHPLBJKB_03605 Ribosomal RNA small subunit methyltransferase A low > 73
Escherichia coli BL21 0.53 ECD_02226 glutathione S-transferase 0.48 ECD_00055 16S rRNA m(6)A1518, m(6)A1519 dimethyltransferase, SAM-dependent — —
Escherichia coli BW25113 0.53 b2301 yfcF predicted enzyme (NCBI) 0.48 b0051 ksgA dimethyladenosine transferase (NCBI) low > 76
Escherichia coli ECRC62 0.53 BNILDI_13310 yfcF glutathione transferase 0.48 BNILDI_08425 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA low > 75
Escherichia coli Nissle 1917 0.53 ECOLIN_RS13355 glutathione transferase 0.49 ECOLIN_RS00285 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Escherichia coli ECOR27 0.53 NOLOHH_14390 yfcF glutathione transferase 0.49 NOLOHH_03180 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia fergusonii Becca 0.53 EFB2_01557 Glutathione S-transferase YfcF 0.49 EFB2_03992 Ribosomal RNA small subunit methyltransferase A low > 86
Escherichia coli ECRC102 0.53 NIAGMN_20540 yfcF glutathione transferase 0.48 NIAGMN_08685 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli ECRC100 0.53 OKFHMN_22770 yfcF glutathione transferase 0.48 OKFHMN_10835 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli ECRC99 0.53 KEDOAH_05425 yfcF glutathione transferase 0.48 KEDOAH_17320 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli ECRC101 0.53 MCAODC_13810 yfcF glutathione transferase 0.48 MCAODC_01350 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA low > 87
Escherichia coli ECRC98 0.53 JDDGAC_26735 yfcF glutathione transferase 0.48 JDDGAC_14430 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA low > 86
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_4925 Probable glutathione S-transferase (EC 2.5.1.18), YfcF homolog 0.46 PfGW456L13_1200 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) — —
Enterobacter asburiae PDN3 0.52 EX28DRAFT_0303 Glutathione S-transferase 0.48 EX28DRAFT_3645 ribosomal RNA small subunit methyltransferase A 0.61 21
Enterobacter sp. TBS_079 0.52 MPMX20_03236 Glutathione S-transferase YfcF 0.48 MPMX20_00747 Ribosomal RNA small subunit methyltransferase A low > 85
Rahnella sp. WP5 0.50 EX31_RS05675 glutathione transferase 0.45 EX31_RS03780 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Pantoea sp. MT58 0.50 IAI47_06310 glutathione transferase 0.48 IAI47_16085 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 76
Erwinia tracheiphila SCR3 0.50 LU632_RS07885 yfcF glutathione transferase 0.45 LU632_RS02730 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 74
Castellaniella sp019104865 MT123 0.45 ABCV34_RS01115 glutathione transferase 0.50 ABCV34_RS09490 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_2168 Probable glutathione S-transferase (EC 2.5.1.18), YfcF homolog 0.46 Pf6N2E2_4805 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) — —

Not shown: 0 genomes with orthologs for HSERO_RS23005 only; 69 genomes with orthologs for HSERO_RS03540 only