| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS04345 | | membrane protein | 1.0 | HSERO_RS02405 | | multidrug transporter | 0.27 | 12 |
| Paraburkholderia sabiae LMG 24235 | 0.64 | QEN71_RS15210 | | NAD(P)/FAD-dependent oxidoreductase | 0.51 | QEN71_RS02530 | | efflux transporter outer membrane subunit | low | > 153 |
| Ralstonia solanacearum PSI07 | 0.63 | RPSI07_RS13540 | | NAD(P)/FAD-dependent oxidoreductase | 0.55 | RPSI07_RS23910 | | multidrug transporter | low | > 81 |
| Cupriavidus basilensis FW507-4G11 | 0.63 | RR42_RS14990 | | membrane protein | 0.60 | RR42_RS20655 | | multidrug transporter | low | > 128 |
| Burkholderia phytofirmans PsJN | 0.61 | BPHYT_RS33560 | | membrane protein | 0.48 | BPHYT_RS16165 | | multidrug transporter | — | — |
| Ralstonia solanacearum GMI1000 | 0.61 | RS_RS11135 | | NAD(P)/FAD-dependent oxidoreductase | 0.55 | RS_RS00040 | | multidrug transporter | low | > 80 |
| Ralstonia solanacearum UW163 | 0.61 | UW163_RS09980 | | NAD(P)/FAD-dependent oxidoreductase | 0.55 | UW163_RS04140 | | multidrug transporter | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.61 | RALBFv3_RS03690 | | NAD(P)/FAD-dependent oxidoreductase | 0.55 | RALBFv3_RS09440 | | multidrug transporter | low | > 76 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.61 | H281DRAFT_06012 | | hypothetical protein | 0.49 | H281DRAFT_04169 | | outer membrane protein, multidrug efflux system | low | > 103 |
| Ralstonia sp. UNC404CL21Col | 0.60 | ABZR87_RS15620 | | NAD(P)/FAD-dependent oxidoreductase | 0.55 | ABZR87_RS05320 | | efflux transporter outer membrane subunit | low | > 80 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.59 | GFF3659 | | NAD(FAD)-utilizing dehydrogenases | 0.40 | GFF3841 | | RND efflux system, outer membrane lipoprotein CmeC | — | — |
| Acidovorax sp. GW101-3H11 | 0.57 | Ac3H11_3253 | | NAD(FAD)-utilizing dehydrogenases | 0.44 | Ac3H11_4447 | | RND efflux system, outer membrane lipoprotein CmeC | low | > 79 |
| Variovorax sp. SCN45 | 0.57 | GFF4713 | | Uncharacterized protein YhiN | 0.43 | GFF3724 | | Efflux transport system, outer membrane factor (OMF) lipoprotein | low | > 127 |
| Variovorax sp. OAS795 | 0.55 | ABID97_RS20650 | | NAD(P)/FAD-dependent oxidoreductase | 0.46 | ABID97_RS00330 | | efflux transporter outer membrane subunit | low | > 91 |
| Rhizobium sp. OAE497 | 0.51 | ABIE40_RS03215 | | NAD(P)/FAD-dependent oxidoreductase | 0.22 | ABIE40_RS14220 | | efflux transporter outer membrane subunit | low | > 107 |
| Agrobacterium fabrum C58 | 0.51 | Atu0603 | | hypothetical protein | 0.20 | Atu2552 | | nodulation protein T precursor | — | — |
| Lysobacter sp. OAE881 | 0.49 | ABIE51_RS09810 | | NAD(P)/FAD-dependent oxidoreductase | 0.25 | ABIE51_RS10130 | | efflux transporter outer membrane subunit | low | > 62 |
| Kangiella aquimarina DSM 16071 | 0.49 | B158DRAFT_1203 | | flavoprotein, HI0933 family | 0.34 | B158DRAFT_0732 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | low | > 40 |
| Pantoea sp. MT58 | 0.47 | IAI47_01370 | | NAD(P)/FAD-dependent oxidoreductase | 0.22 | IAI47_12395 | | efflux transporter outer membrane subunit | low | > 76 |
| Escherichia coli Nissle 1917 | 0.46 | ECOLIN_RS19955 | | NAD(P)/FAD-dependent oxidoreductase | 0.39 | ECOLIN_RS03130 | | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | — | — |
| Escherichia coli ECRC62 | 0.46 | BNILDI_03180 | yhiN | Uncharacterized protein YhiN | 0.39 | BNILDI_22090 | cusC | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | low | > 75 |
| Escherichia coli BL21 | 0.46 | ECD_03341 | | putative oxidoreductase | 0.39 | ECD_00533 | | copper/silver efflux system, outer membrane component | low | > 61 |
| Escherichia coli ECOR27 | 0.46 | NOLOHH_08380 | yhiN | Uncharacterized protein YhiN | 0.39 | NOLOHH_24080 | cusC | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | low | > 75 |
| Escherichia coli ECOR38 | 0.46 | HEPCGN_15360 | yhiN | Uncharacterized protein YhiN | 0.39 | HEPCGN_00590 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | low | > 87 |
| Escherichia coli BW25113 | 0.46 | b3492 | yhiN | predicted oxidoreductase with FAD/NAD(P)-binding domain (NCBI) | 0.39 | b0572 | cusC | copper/silver efflux system, outer membrane component (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.46 | OHPLBJKB_00211 | | hypothetical protein | 0.38 | OHPLBJKB_03137 | | Cation efflux system protein CusC | low | > 73 |
| Escherichia coli ECRC100 | 0.46 | OKFHMN_16445 | yhiN | Uncharacterized protein YhiN | 0.39 | OKFHMN_07700 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | low | > 80 |
| Escherichia coli ECRC98 | 0.46 | JDDGAC_20075 | yhiN | Uncharacterized protein YhiN | 0.39 | JDDGAC_11345 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | low | > 86 |
| Escherichia fergusonii Becca | 0.46 | EFB2_00323 | | hypothetical protein | 0.39 | EFB2_03522 | | Cation efflux system protein CusC | low | > 86 |
| Escherichia coli ECRC99 | 0.46 | KEDOAH_11700 | yhiN | Uncharacterized protein YhiN | 0.39 | KEDOAH_20270 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | — | — |
| Escherichia coli ECRC101 | 0.46 | MCAODC_06960 | yhiN | Uncharacterized protein YhiN | 0.39 | MCAODC_26915 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.57 | 14 |
| Escherichia coli ECRC102 | 0.46 | NIAGMN_14210 | yhiN | Uncharacterized protein YhiN | 0.39 | NIAGMN_05755 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.37 | DvMF_0830 | | HI0933 family protein (RefSeq) | 0.30 | DvMF_2162 | | RND efflux system, outer membrane lipoprotein, NodT family (RefSeq) | low | > 51 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.36 | CA265_RS07750 | | aminoacetone oxidase family FAD-binding enzyme | 0.20 | CA265_RS05050 | | RND transporter | low | > 88 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.36 | ABZR88_RS09315 | | NAD(P)/FAD-dependent oxidoreductase | 0.17 | ABZR88_RS12550 | | efflux transporter outer membrane subunit | low | > 71 |
Not shown: 52 genomes with orthologs for HSERO_RS04345 only; 7 genomes with orthologs for HSERO_RS02405 only