Conservation of cofitness between HSERO_RS02305 and HSERO_RS01990 in Herbaspirillum seropedicae SmR1

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS02305 ABC transporter ATP-binding protein 1.0 HSERO_RS01990 shikimate 5-dehydrogenase 0.34 8
Paraburkholderia graminis OAS925 0.71 ABIE53_005744 NitT/TauT family transport system permease protein 0.53 ABIE53_003560 shikimate dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_01068 NitT/TauT family transport system permease protein 0.53 H281DRAFT_06291 shikimate dehydrogenase (EC 1.1.1.25) — —
Acidovorax sp. GW101-3H11 0.68 Ac3H11_3724 Hydroxymethylpyrimidine ABC transporter, transmembrane component 0.42 Ac3H11_4044 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) low > 79
Variovorax sp. OAS795 0.68 ABID97_RS25330 ABC transporter permease 0.40 ABID97_RS06300 shikimate dehydrogenase — —
Variovorax sp. SCN45 0.68 GFF1968 Hydroxymethylpyrimidine ABC transporter, transmembrane component 0.42 GFF4456 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) low > 127
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS36235 ABC transporter ATP-binding protein 0.50 RR42_RS17645 shikimate dehydrogenase low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF4950 Hydroxymethylpyrimidine ABC transporter, transmembrane component 0.48 GFF5226 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) low > 90
Pseudomonas putida KT2440 0.63 PP_3210 ABC transporter, permease protein 0.53 PP_0074 shikimate 5-dehydrogenase — —
Pantoea sp. MT58 0.63 IAI47_07375 ABC transporter permease 0.48 IAI47_02315 shikimate dehydrogenase — —
Rahnella sp. WP5 0.61 EX31_RS11130 ABC transporter permease 0.41 EX31_RS15950 shikimate dehydrogenase — —
Bosea sp. OAE506 0.56 ABIE41_RS21915 ABC transporter permease 0.21 ABIE41_RS04650 shikimate dehydrogenase — —
Rhodopseudomonas palustris CGA009 0.46 TX73_002425 ABC transporter permease 0.20 TX73_022410 shikimate dehydrogenase — —
Dinoroseobacter shibae DFL-12 0.44 Dshi_1382 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.25 Dshi_3450 shikimate 5-dehydrogenase (RefSeq) — —
Caulobacter crescentus NA1000 0.35 CCNA_02718 taurine transport system permease protein tauC 0.18 CCNA_00003 shikimate dehydrogenase (EC 1.1.1.25) (from data) low > 66
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_02718 taurine transport system permease protein tauC 0.18 CCNA_00003 shikimate 5-dehydrogenase low > 67
Azospirillum brasilense Sp245 0.31 AZOBR_RS11760 ABC transporter permease 0.19 AZOBR_RS01765 shikimate 5-dehydrogenase — —
Sinorhizobium meliloti 1021 0.23 SMc01826 ABC transporter permease 0.22 SMc02791 shikimate 5-dehydrogenase — —
Phaeobacter inhibens DSM 17395 0.20 PGA1_c12880 putative ABC transporter permease protein 0.24 PGA1_c35150 shikimate dehydrogenase AroE — —

Not shown: 0 genomes with orthologs for HSERO_RS02305 only; 84 genomes with orthologs for HSERO_RS01990 only