Conservation of cofitness between HER17_RS04205 and HER17_RS20670 in Pectobacterium carotovorum WPP14

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS04205 6-carboxytetrahydropterin synthase QueD 1.0 HER17_RS20670 dienelactone hydrolase family protein 0.55 17
Dickeya dadantii 3937 0.94 DDA3937_RS16965 6-carboxytetrahydropterin synthase QueD 0.76 DDA3937_RS20375 dienelactone hydrolase family protein low > 74
Dickeya dianthicola ME23 0.93 DZA65_RS18105 6-carboxytetrahydropterin synthase QueD 0.76 DZA65_RS00880 dienelactone hydrolase family protein low > 75
Dickeya dianthicola 67-19 0.93 HGI48_RS17030 6-carboxytetrahydropterin synthase QueD 0.76 HGI48_RS00825 dienelactone hydrolase family protein low > 71
Enterobacter asburiae PDN3 0.90 EX28DRAFT_2854 queuosine biosynthesis protein QueD 0.71 EX28DRAFT_4495 Dienelactone hydrolase and related enzymes low > 76
Escherichia coli BW25113 0.89 b2765 ygcM 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) (NCBI) 0.69 b3830 ysgA predicted hydrolase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.89 OHPLBJKB_00968 6-carboxy-5,6,7,8-tetrahydropterin synthase 0.69 OHPLBJKB_04221 Carboxymethylenebutenolidase low > 73
Escherichia coli ECOR27 0.89 NOLOHH_12180 queD 6-carboxytetrahydropterin synthase QueD 0.69 NOLOHH_06450 ysgA Putative carboxymethylenebutenolidase low > 75
Escherichia coli ECRC100 0.89 OKFHMN_20365 queD 6-carboxytetrahydropterin synthase QueD 0.69 OKFHMN_14320 ysgA Putative carboxymethylenebutenolidase low > 80
Escherichia coli Nissle 1917 0.89 ECOLIN_RS15415 6-carboxytetrahydropterin synthase QueD 0.69 ECOLIN_RS22070 dienelactone hydrolase family protein low > 55
Escherichia fergusonii Becca 0.89 EFB2_01152 6-carboxy-5,6,7,8-tetrahydropterin synthase 0.69 EFB2_04791 Carboxymethylenebutenolidase low > 86
Escherichia coli ECRC98 0.89 JDDGAC_24030 queD 6-carboxytetrahydropterin synthase QueD 0.69 JDDGAC_17945 ysgA Putative carboxymethylenebutenolidase low > 86
Enterobacter sp. TBS_079 0.89 MPMX20_03644 6-carboxy-5,6,7,8-tetrahydropterin synthase 0.72 MPMX20_04450 Carboxymethylenebutenolidase low > 85
Escherichia coli BL21 0.89 ECD_02610 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) 0.69 ECD_03717 putative carboxymethylenebutenolidase low > 61
Escherichia coli ECRC101 0.89 MCAODC_10890 queD 6-carboxytetrahydropterin synthase QueD 0.69 MCAODC_04825 ysgA Putative carboxymethylenebutenolidase low > 87
Klebsiella michiganensis M5al 0.89 BWI76_RS22775 6-carboxytetrahydropterin synthase QueD 0.68 BWI76_RS01290 putative dienelactone hydrolase low > 92
Escherichia coli ECRC99 0.89 KEDOAH_07760 queD 6-carboxytetrahydropterin synthase QueD 0.69 KEDOAH_13830 ysgA Putative carboxymethylenebutenolidase
Escherichia coli ECRC62 0.89 BNILDI_10730 queD 6-carboxytetrahydropterin synthase QueD 0.69 BNILDI_05080 ysgA Putative carboxymethylenebutenolidase low > 75
Escherichia coli ECRC102 0.89 NIAGMN_18135 queD 6-carboxytetrahydropterin synthase QueD 0.69 NIAGMN_12075 ysgA Putative carboxymethylenebutenolidase
Escherichia coli ECOR38 0.88 HEPCGN_19100 queD 6-carboxytetrahydropterin synthase QueD 0.69 HEPCGN_12990 ysgA Putative carboxymethylenebutenolidase low > 87
Serratia liquefaciens MT49 0.88 IAI46_03680 6-carboxytetrahydropterin synthase QueD 0.75 IAI46_01040 dienelactone hydrolase family protein low > 86
Pantoea sp. MT58 0.86 IAI47_04145 6-carboxytetrahydropterin synthase QueD 0.71 IAI47_18305 dienelactone hydrolase family protein low > 76
Rahnella sp. WP5 0.86 EX31_RS07915 6-carboxytetrahydropterin synthase QueD 0.70 EX31_RS14650 dienelactone hydrolase family protein low > 89
Erwinia tracheiphila SCR3 0.86 LU632_RS06395 queD 6-carboxytetrahydropterin synthase QueD 0.69 LU632_RS24025 dienelactone hydrolase family protein low > 74
Lysobacter sp. OAE881 0.71 ABIE51_RS17950 6-carboxytetrahydropterin synthase QueD 0.18 ABIE51_RS12930 dienelactone hydrolase family protein low > 62
Pseudomonas putida KT2440 0.70 PP_2341 6-carboxy-5,6,7,8-tetrahydropterin synthase 0.11 PP_1184 Dienelactone hydrolase family protein low > 96
Xanthomonas campestris pv. campestris strain 8004 0.67 Xcc-8004.4528.1 hypothetical protein 0.14 Xcc-8004.1935.1 Dienelactone hydrolase family low > 74
Pseudomonas sp. S08-1 0.65 OH686_00030 queuosine biosynthesis protein QueD 0.11 OH686_20480 Dienelactone hydrolase family protein low > 80
Rhodanobacter denitrificans MT42 0.65 LRK55_RS09085 6-carboxytetrahydropterin synthase QueD 0.15 LRK55_RS01565 dienelactone hydrolase family protein low > 63
Rhodanobacter sp. FW510-T8 0.63 OKGIIK_15925 queD 6-carboxytetrahydropterin synthase QueD 0.16 OKGIIK_04750 dLH carboxymethylenebutenolidase low > 52
Rhodanobacter denitrificans FW104-10B01 0.63 LRK54_RS09655 6-carboxytetrahydropterin synthase QueD 0.14 LRK54_RS01785 dienelactone hydrolase family protein low > 59
Dyella japonica UNC79MFTsu3.2 0.61 ABZR86_RS13650 6-carboxytetrahydropterin synthase QueD 0.18 ABZR86_RS08115 dienelactone hydrolase family protein low > 74
Rhodopseudomonas palustris CGA009 0.53 TX73_008525 6-carboxytetrahydropterin synthase QueD 0.21 TX73_025110 dienelactone hydrolase family protein low > 86
Agrobacterium fabrum C58 0.33 Atu3345 6-pyruvoyl tetrahydrobiopterin synthase 0.21 Atu0627 carboxymethylenebutenolidase low > 89
Sinorhizobium meliloti 1021 0.32 SM_b20939 6-pyruvoyl-tetrahydropterin synthase 0.18 SMc00817 carboxymethylenebutenolidase (dienelactone hydrolase) protein low > 103
Brevundimonas sp. GW460-12-10-14-LB2 0.32 A4249_RS08690 6-carboxytetrahydropterin synthase 0.42 A4249_RS13145 dienelactone hydrolase family protein
Acidovorax sp. GW101-3H11 0.28 Ac3H11_3826 6-carboxytetrahydropterin synthase (EC 4.1.2.50) @ Queuosine biosynthesis QueD, PTPS-I 0.55 Ac3H11_1638 Dienelactone hydrolase family low > 79
Variovorax sp. SCN45 0.28 GFF2576 6-carboxy-5,6,7,8-tetrahydropterin synthase (EC 4.1.2.50) 0.53 GFF6106 Dienelactone hydrolase family protein low > 127
Variovorax sp. OAS795 0.27 ABID97_RS07420 6-carboxytetrahydropterin synthase 0.52 ABID97_RS09210 dienelactone hydrolase family protein low > 91

Not shown: 22 genomes with orthologs for HER17_RS04205 only; 24 genomes with orthologs for HER17_RS20670 only