Conservation of cofitness between HER17_RS20780 and HER17_RS17925 in Pectobacterium carotovorum WPP14

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS20780 lipopolysaccharide heptosyltransferase RfaC 1.0 HER17_RS17925 FAD assembly factor SdhE 0.85 18
Dickeya dianthicola ME23 0.78 DZA65_RS00815 lipopolysaccharide heptosyltransferase RfaC 0.86 DZA65_RS03465 FAD assembly factor SdhE — —
Dickeya dadantii 3937 0.77 DDA3937_RS20450 lipopolysaccharide heptosyltransferase RfaC 0.87 DDA3937_RS03280 FAD assembly factor SdhE — —
Dickeya dianthicola 67-19 0.77 HGI48_RS00760 lipopolysaccharide heptosyltransferase RfaC 0.87 HGI48_RS03420 FAD assembly factor SdhE — —
Rahnella sp. WP5 0.77 EX31_RS14405 lipopolysaccharide heptosyltransferase RfaC 0.84 EX31_RS13495 FAD assembly factor SdhE low > 89
Serratia liquefaciens MT49 0.77 IAI46_24745 lipopolysaccharide heptosyltransferase RfaC 0.86 IAI46_20760 FAD assembly factor SdhE — —
Escherichia coli ECOR27 0.73 NOLOHH_07570 rfaC lipopolysaccharide heptosyltransferase RfaC 0.81 NOLOHH_11480 sdhE FAD assembly factor SdhE — —
Pantoea sp. MT58 0.73 IAI47_00680 lipopolysaccharide heptosyltransferase RfaC 0.82 IAI47_03805 FAD assembly factor SdhE — —
Escherichia coli BW25113 0.72 b3621 rfaC ADP-heptose:LPS heptosyl transferase I (NCBI) 0.81 b2897 ygfY hypothetical protein (NCBI) low > 76
Escherichia coli ECRC102 0.72 NIAGMN_13450 rfaC lipopolysaccharide heptosyltransferase RfaC 0.81 NIAGMN_17320 sdhE FAD assembly factor SdhE — —
Escherichia coli ECRC101 0.72 MCAODC_06200 rfaC lipopolysaccharide heptosyltransferase RfaC 0.81 MCAODC_10075 sdhE FAD assembly factor SdhE — —
Escherichia coli ECRC100 0.72 OKFHMN_15690 rfaC lipopolysaccharide heptosyltransferase RfaC 0.81 OKFHMN_19555 sdhE FAD assembly factor SdhE — —
Escherichia coli ECRC99 0.72 KEDOAH_12460 rfaC lipopolysaccharide heptosyltransferase RfaC 0.81 KEDOAH_08585 sdhE FAD assembly factor SdhE — —
Escherichia coli ECRC98 0.72 JDDGAC_19315 rfaC lipopolysaccharide heptosyltransferase RfaC 0.81 JDDGAC_23195 sdhE FAD assembly factor SdhE — —
Enterobacter sp. TBS_079 0.72 MPMX20_00112 Lipopolysaccharide heptosyltransferase 1 0.84 MPMX20_03756 FAD assembly factor SdhE — —
Escherichia coli Nissle 1917 0.72 ECOLIN_RS20655 lipopolysaccharide heptosyltransferase RfaC 0.81 ECOLIN_RS16140 FAD assembly factor SdhE low > 55
Escherichia fergusonii Becca 0.72 EFB2_00190 Lipopolysaccharide heptosyltransferase 1 0.81 EFB2_01004 FAD assembly factor SdhE — —
Escherichia coli BL21 0.71 ECD_03478 ADP-heptose:LPS heptosyl transferase I 0.81 ECD_02729 flavinator of succinate dehydrogenase; antitoxin of CptAB toxin-antitoxin pair — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_00079 Lipopolysaccharide heptosyltransferase 1 0.81 OHPLBJKB_00818 FAD assembly factor SdhE — —
Escherichia coli ECOR38 0.71 HEPCGN_14535 rfaC lipopolysaccharide heptosyltransferase RfaC 0.81 HEPCGN_18845 sdhE FAD assembly factor SdhE — —
Enterobacter asburiae PDN3 0.71 EX28DRAFT_3873 lipopolysaccharide heptosyltransferase I 0.83 EX28DRAFT_2948 Uncharacterized conserved protein — —
Escherichia coli ECRC62 0.71 BNILDI_03940 rfaC lipopolysaccharide heptosyltransferase RfaC 0.81 BNILDI_10010 sdhE FAD assembly factor SdhE — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF390 Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) 0.84 GFF2994 YgfY COG2938 low > 78
Erwinia tracheiphila SCR3 0.70 LU632_RS21925 rfaC lipopolysaccharide heptosyltransferase RfaC 0.81 LU632_RS05960 sdhE FAD assembly factor SdhE — —
Klebsiella michiganensis M5al 0.68 BWI76_RS27270 ADP-heptose--LPS heptosyl transferase I 0.85 BWI76_RS23830 hypothetical protein — —
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_1472 Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) 0.42 Pf1N1B4_3320 YgfY COG2938 — —
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_211 Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) 0.42 PfGW456L13_4519 YgfY COG2938 — —
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_12880 ADP-heptose--LPS heptosyltransferase 0.40 AO353_17610 hypothetical protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_0521 Glycosyl transferase, family 9 0.40 Psyr_3961 Protein of unknown function DUF339 — —
Pseudomonas simiae WCS417 0.50 PS417_02235 ADP-heptose--LPS heptosyltransferase 0.42 PS417_07105 hypothetical protein — —
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_0521 Glycosyl transferase, family 9 0.40 Psyr_3961 Protein of unknown function DUF339 — —
Pseudomonas fluorescens SBW25 0.50 PFLU_RS02290 lipopolysaccharide heptosyltransferase I 0.42 PFLU_RS07180 succinate dehydrogenase assembly factor 2 — —
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS02290 lipopolysaccharide heptosyltransferase I 0.42 PFLU_RS07180 succinate dehydrogenase assembly factor 2 — —
Pseudomonas sp. RS175 0.49 PFR28_05064 Lipopolysaccharide heptosyltransferase 1 0.41 PFR28_00687 FAD assembly factor SdhE — —
Pseudomonas stutzeri RCH2 0.49 Psest_0452 lipopolysaccharide heptosyltransferase I 0.41 Psest_3103 Uncharacterized conserved protein — —
Pseudomonas sp. S08-1 0.48 OH686_09685 lipopolysaccharide heptosyltransferase I 0.40 OH686_20030 Succinate dehydrogenase flavin-adding protein, antitoxin of CptAB toxin-antitoxin — —
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_08945 ADP-heptose--LPS heptosyltransferase 0.42 AO356_04590 hypothetical protein — —
Pseudomonas putida KT2440 0.48 PP_0342 ADP-heptose:LPS heptosyltransferase I 0.42 PP_1424 conserved protein of unknown function, DUF339 family — —
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_3670 Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) 0.42 Pf6N2E2_2760 YgfY COG2938 — —
Marinobacter adhaerens HP15 0.11 HP15_438 lipopolysaccharide biosynthesis protein 0.33 HP15_773 conserved hypothetical protein — —

Not shown: 16 genomes with orthologs for HER17_RS20780 only; 10 genomes with orthologs for HER17_RS17925 only