Conservation of cofitness between HER17_RS12930 and HER17_RS17590 in Pectobacterium carotovorum WPP14

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12930 microcin C ABC transporter permease 1.0 HER17_RS17590 fructuronate reductase 0.58 6
Dickeya dianthicola 67-19 0.87 HGI48_RS09220 ABC transporter permease subunit 0.71 HGI48_RS03640 fructuronate reductase low > 71
Dickeya dadantii 3937 0.87 DDA3937_RS09180 ABC transporter permease subunit 0.72 DDA3937_RS03550 fructuronate reductase low > 74
Dickeya dianthicola ME23 0.85 DZA65_RS09525 ABC transporter permease subunit 0.72 DZA65_RS03760 fructuronate reductase 0.37 24
Serratia liquefaciens MT49 0.79 IAI46_17325 ABC transporter permease subunit 0.66 IAI46_17285 fructuronate reductase low > 86
Escherichia coli BW25113 0.76 b2179 yejE predicted oligopeptide transporter subunit (NCBI) 0.60 b2172 yeiQ predicted dehydrogenase, NAD-dependent (NCBI) low > 76
Escherichia coli ECOR27 0.76 NOLOHH_14955 yejE Inner membrane ABC transporter permease protein YejE 0.61 NOLOHH_14990 yeiQ Uncharacterized oxidoreductase YeiQ low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF3757 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.52 GFF3094 D-mannonate oxidoreductase (EC 1.1.1.57) low > 78
Escherichia coli BL21 0.76 ECD_02109 microcin C ABC transporter permease 0.60 ECD_02102 putative NAD-dependent D-mannonate oxidoreductase low > 61
Escherichia fergusonii Becca 0.76 EFB2_01677 Inner membrane ABC transporter permease protein YejE 0.60 EFB2_01684 Mannitol 2-dehydrogenase low > 86
Escherichia coli Nissle 1917 0.76 ECOLIN_RS12740 ABC transporter permease 0.61 ECOLIN_RS12705 mannitol dehydrogenase family protein — —
Escherichia coli ECRC62 0.76 BNILDI_13875 yejE Inner membrane ABC transporter permease protein YejE 0.61 BNILDI_13910 yeiQ Uncharacterized oxidoreductase YeiQ low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_01530 Inner membrane ABC transporter permease protein YejE 0.61 OHPLBJKB_01537 Mannitol 2-dehydrogenase low > 73
Escherichia coli ECRC99 0.76 KEDOAH_04805 yejE Inner membrane ABC transporter permease protein YejE 0.60 KEDOAH_04770 yeiQ Uncharacterized oxidoreductase YeiQ — —
Escherichia coli ECRC98 0.76 JDDGAC_27340 yejE Inner membrane ABC transporter permease protein YejE 0.60 JDDGAC_27375 yeiQ Uncharacterized oxidoreductase YeiQ low > 86
Escherichia coli ECRC102 0.76 NIAGMN_21145 yejE Inner membrane ABC transporter permease protein YejE 0.60 NIAGMN_21180 yeiQ Uncharacterized oxidoreductase YeiQ — —
Escherichia coli ECOR38 0.76 HEPCGN_22645 yejE Inner membrane ABC transporter permease protein YejE 0.60 HEPCGN_22680 yeiQ Uncharacterized oxidoreductase YeiQ low > 87
Escherichia coli ECRC100 0.76 OKFHMN_23380 yejE Inner membrane ABC transporter permease protein YejE 0.60 OKFHMN_23415 yeiQ Uncharacterized oxidoreductase YeiQ low > 80
Escherichia coli ECRC101 0.76 MCAODC_14430 yejE Inner membrane ABC transporter permease protein YejE 0.60 MCAODC_14465 yeiQ Uncharacterized oxidoreductase YeiQ low > 87
Klebsiella michiganensis M5al 0.75 BWI76_RS19790 putative binding-protein-dependent transporter 0.60 BWI76_RS19755 fructuronate reductase low > 92
Enterobacter sp. TBS_079 0.74 MPMX20_03145 Inner membrane ABC transporter permease protein YejE 0.61 MPMX20_03138 Polyol:NADP oxidoreductase low > 85
Enterobacter asburiae PDN3 0.74 EX28DRAFT_0382 ABC-type uncharacterized transport system, permease component 0.61 EX28DRAFT_0389 Mannitol-1-phosphate/altronate dehydrogenases low > 76
Rahnella sp. WP5 0.73 EX31_RS19140 ABC transporter permease subunit 0.65 EX31_RS19095 fructuronate reductase low > 89
Pseudomonas sp. RS175 0.63 PFR28_01547 Inner membrane ABC transporter permease protein YejE 0.32 PFR28_01709 Polyol:NADP oxidoreductase low > 88
Pseudomonas fluorescens SBW25 0.63 PFLU_RS12885 ABC transporter permease 0.33 PFLU_RS13385 mannitol dehydrogenase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS12885 ABC transporter permease 0.33 PFLU_RS13385 mannitol dehydrogenase family protein low > 109
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_3345 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.32 PfGW456L13_3038 mannitol 2-dehydrogenase (EC 1.1.1.67) (from data) low > 87
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_582 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.32 Pf6N2E2_806 Multiple polyol-specific dehydrogenase (EC 1.1.1.-) low > 103
Rhizobium sp. OAE497 0.62 ABIE40_RS00625 ABC transporter permease 0.35 ABIE40_RS00125 mannitol dehydrogenase family protein low > 107
Pseudomonas simiae WCS417 0.61 PS417_12195 ABC transporter permease 0.32 PS417_12695 mannitol dehydrogenase low > 88
Agrobacterium fabrum C58 0.58 Atu0189 ABC transporter, membrane spanning protein (peptide) 0.29 Atu3530 mannitol dehydrogenase low > 89
Phaeobacter inhibens DSM 17395 0.53 PGA1_c30160 ABC transporter permease protein 0.25 PGA1_c13160 mannitol 2-dehydrogenase MtlK low > 62
Variovorax sp. SCN45 0.52 GFF227 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) 0.36 GFF179 D-mannonate oxidoreductase (EC 1.1.1.57) low > 127
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_00562 microcin C transport system permease protein 0.37 H281DRAFT_02952 fructuronate reductase low > 103
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS07165 peptide ABC transporter permease 0.37 BPHYT_RS28510 dioxygenase low > 109
Paraburkholderia graminis OAS925 0.50 ABIE53_002548 microcin C transport system permease protein 0.35 ABIE53_005161 fructuronate reductase low > 113
Ralstonia solanacearum GMI1000 0.49 RS_RS05860 ABC transporter permease 0.20 RS_RS10685 D-arabinitol 4-dehydrogenase low > 80
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS13375 peptide ABC transporter permease 0.35 RR42_RS34965 dioxygenase low > 128
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS17135 peptide ABC transporter permease 0.20 HSERO_RS02215 D-arabinitol 4-dehydrogenase low > 78
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS06180 ABC transporter permease 0.20 QEN71_RS02630 mannitol dehydrogenase family protein low > 153

Not shown: 28 genomes with orthologs for HER17_RS12930 only; 6 genomes with orthologs for HER17_RS17590 only