Conservation of cofitness between HER17_RS01910 and HER17_RS15420 in Pectobacterium carotovorum WPP14

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS01910 aspartate aminotransferase family protein 1.0 HER17_RS15420 glycine cleavage system transcriptional repressor 0.78 13
Dickeya dadantii 3937 0.86 DDA3937_RS19450 aspartate aminotransferase family protein 0.89 DDA3937_RS06060 glycine cleavage system transcriptional repressor low > 74
Dickeya dianthicola 67-19 0.86 HGI48_RS19570 aspartate aminotransferase family protein 0.88 HGI48_RS06105 glycine cleavage system transcriptional repressor low > 71
Dickeya dianthicola ME23 0.86 DZA65_RS20655 aspartate aminotransferase family protein 0.88 DZA65_RS06455 glycine cleavage system transcriptional repressor low > 75
Serratia liquefaciens MT49 0.82 IAI46_23590 aspartate aminotransferase family protein 0.82 IAI46_18785 glycine cleavage system transcriptional repressor low > 86
Klebsiella michiganensis M5al 0.80 BWI76_RS26000 aspartate aminotransferase family protein 0.72 BWI76_RS20910 glycine cleavage system transcriptional repressor low > 92
Rahnella sp. WP5 0.79 EX31_RS04630 aspartate aminotransferase family protein 0.79 EX31_RS22735 glycine cleavage system transcriptional repressor 0.78 81
Escherichia coli BL21 0.79 ECD_03210 bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase 0.78 ECD_02371 transcriptional repressor, regulatory protein accessory to GcvA low > 61
Enterobacter sp. TBS_079 0.79 MPMX20_04262 Acetylornithine/succinyldiaminopimelate aminotransferase 0.76 MPMX20_03341 Glycine cleavage system transcriptional repressor low > 85
Escherichia coli BW25113 0.79 b3359 argD bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase (NCBI) 0.78 b2479 gcvR transcriptional regulation of gcv operon (VIMSS) low > 76
Escherichia coli ECOR27 0.79 NOLOHH_09030 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.78 NOLOHH_13570 gcvR glycine cleavage system transcriptional repressor low > 75
Escherichia fergusonii Becca 0.79 EFB2_00463 Acetylornithine/succinyldiaminopimelate aminotransferase 0.78 EFB2_01407 Glycine cleavage system transcriptional repressor low > 86
Escherichia coli ECRC62 0.78 BNILDI_02490 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.78 BNILDI_12380 gcvR glycine cleavage system transcriptional repressor low > 75
Escherichia coli Nissle 1917 0.78 ECOLIN_RS19240 bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.78 ECOLIN_RS14150 glycine cleavage system transcriptional repressor low > 55
Escherichia coli ECOR38 0.78 HEPCGN_16055 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.78 HEPCGN_21080 gcvR glycine cleavage system transcriptional repressor low > 87
Escherichia coli ECRC100 0.78 OKFHMN_17230 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.78 OKFHMN_21910 gcvR glycine cleavage system transcriptional repressor low > 80
Escherichia coli ECRC101 0.78 MCAODC_07760 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.78 MCAODC_12440 gcvR glycine cleavage system transcriptional repressor low > 87
Escherichia coli ECRC102 0.78 NIAGMN_15000 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.78 NIAGMN_19680 gcvR glycine cleavage system transcriptional repressor
Escherichia coli ECRC99 0.78 KEDOAH_10910 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.78 KEDOAH_06310 gcvR glycine cleavage system transcriptional repressor
Escherichia coli ECRC98 0.78 JDDGAC_20860 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.78 JDDGAC_25855 gcvR glycine cleavage system transcriptional repressor low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF3710 Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) 0.78 GFF2179 Glycine cleavage system transcriptional antiactivator GcvR low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_00343 Acetylornithine/succinyldiaminopimelate aminotransferase 0.78 OHPLBJKB_01250 Glycine cleavage system transcriptional repressor low > 73
Enterobacter asburiae PDN3 0.78 EX28DRAFT_4170 transaminase, acetylornithine/succinylornithine family/succinylornithine transaminase family 0.75 EX28DRAFT_0181 Glycine cleavage system regulatory protein 0.68 41
Erwinia tracheiphila SCR3 0.77 LU632_RS22810 aspartate aminotransferase family protein 0.76 LU632_RS08320 glycine cleavage system transcriptional repressor low > 74
Shewanella oneidensis MR-1 0.65 SO0617 argD acetylornithine aminotransferase (NCBI ptt file) 0.30 SO1878 glycine cleavage system transcriptional repressor, putative (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.65 Sama_3011 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.32 Sama_1909 glycine cleavage system transcriptional repressor, putative (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.65 MIT1002_00437 Succinylornithine transaminase/acetylornithine aminotransferase 0.21 MIT1002_02208 Gcv operon repressor low > 70
Shewanella sp. ANA-3 0.65 Shewana3_0610 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.29 Shewana3_1655 glycine cleavage system transcriptional repressor, putative (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_13250 aspartate aminotransferase family protein 0.37 CSW01_10760 glycine cleavage system transcriptional regulator low > 62
Lysobacter sp. OAE881 0.48 ABIE51_RS17420 acetylornithine/succinyldiaminopimelate transaminase 0.19 ABIE51_RS07990 glycine cleavage system protein R low > 62
Rhodanobacter denitrificans MT42 0.46 LRK55_RS06335 acetylornithine/succinylornithine family transaminase 0.19 LRK55_RS14795 glycine cleavage system protein R low > 63
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS17400 acetylornithine transaminase 0.21 ABZR86_RS00780 glycine cleavage system protein R low > 74
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_17070 astC acetylornithine transaminase 0.19 OKGIIK_03850 Glycine cleavage system transcriptional repressor low > 52
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.1117.1 hypothetical protein 0.19 Xcc-8004.3086.1 Glycine cleavage system transcriptional antiactivator GcvR
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS06590 acetylornithine/succinylornithine family transaminase 0.19 LRK54_RS15080 glycine cleavage system protein R low > 59

Not shown: 66 genomes with orthologs for HER17_RS01910 only; 0 genomes with orthologs for HER17_RS15420 only