Conservation of cofitness between HER17_RS21560 and HER17_RS13510 in Pectobacterium carotovorum WPP14

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS21560 response regulator 1.0 HER17_RS13510 dipeptide ABC transporter ATP-binding protein 0.58 11
Pantoea sp. MT58 0.79 IAI47_00340 response regulator 0.71 IAI47_13130 dipeptide ABC transporter ATP-binding protein low > 76
Rahnella sp. WP5 0.76 EX31_RS03275 response regulator 0.72 EX31_RS18740 dipeptide ABC transporter ATP-binding protein low > 89
Enterobacter asburiae PDN3 0.74 EX28DRAFT_3057 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.66 EX28DRAFT_2135 ATPase components of various ABC-type transport systems, contain duplicated ATPase low > 76
Serratia liquefaciens MT49 0.74 IAI46_21235 response regulator 0.76 IAI46_07845 dipeptide ABC transporter ATP-binding protein low > 86
Enterobacter sp. TBS_079 0.72 MPMX20_03863 Transcriptional regulatory protein QseB 0.67 MPMX20_01469 Glutathione import ATP-binding protein GsiA low > 85
Klebsiella michiganensis M5al 0.72 BWI76_RS24335 two-component system response regulator QseB 0.67 BWI76_RS09095 glutathione ABC transporter ATP-binding protein GsiA low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF3138 Two-component system response regulator QseB 0.67 GFF727 Dipeptide transport ATP-binding protein DppD in protein degradation cluster low > 78
Escherichia coli ECRC98 0.71 JDDGAC_22515 Transcriptional regulatory protein QseB 0.66 JDDGAC_09735 gsiA glutathione ABC transporter ATP-binding protein GsiA low > 86
Escherichia coli ECRC101 0.71 MCAODC_09395 Transcriptional regulatory protein QseB 0.66 MCAODC_25315 gsiA glutathione ABC transporter ATP-binding protein GsiA low > 87
Escherichia coli ECRC99 0.71 KEDOAH_09265 Transcriptional regulatory protein QseB 0.66 KEDOAH_21810 gsiA glutathione ABC transporter ATP-binding protein GsiA — —
Escherichia coli ECRC100 0.71 OKFHMN_18880 Transcriptional regulatory protein QseB 0.66 OKFHMN_06100 gsiA glutathione ABC transporter ATP-binding protein GsiA low > 80
Escherichia coli ECRC102 0.71 NIAGMN_16645 Transcriptional regulatory protein QseB 0.66 NIAGMN_04145 gsiA glutathione ABC transporter ATP-binding protein GsiA — —
Escherichia coli ECOR27 0.71 NOLOHH_10660 Transcriptional regulatory protein QseB 0.66 NOLOHH_22460 gsiA glutathione ABC transporter ATP-binding protein GsiA low > 75
Escherichia coli ECRC62 0.71 BNILDI_00855 Transcriptional regulatory protein QseB 0.66 BNILDI_20735 gsiA glutathione ABC transporter ATP-binding protein GsiA low > 75
Escherichia coli BW25113 0.71 b3025 qseB DNA-binding response regulator in two-component regulatory system with QseC (NCBI) 0.66 b0829 gsiA fused predicted peptide transport subunits of ABC superfamily: ATP-binding components (RefSeq) low > 76
Escherichia coli ECOR38 0.70 HEPCGN_17740 Quorum sensing DNA-binding response regulator in two-component regulatory system with QseC 0.67 HEPCGN_01930 gsiA glutathione ABC transporter ATP-binding protein GsiA low > 87
Escherichia fergusonii Becca 0.70 EFB2_00788 Transcriptional regulatory protein QseB 0.66 EFB2_03277 Glutathione import ATP-binding protein GsiA low > 86
Escherichia coli BL21 0.70 ECD_02897 quorum sensing DNA-binding response regulator in two-component regulatory system with QseC 0.66 ECD_00796 glutathione ABC transporter ATPase low > 61
Escherichia coli Nissle 1917 0.70 ECOLIN_RS17425 quorum sensing response regulator transcription factor QseB 0.66 ECOLIN_RS04410 glutathione ABC transporter ATP-binding protein GsiA low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_00677 Transcriptional regulatory protein QseB 0.66 OHPLBJKB_02883 Glutathione import ATP-binding protein GsiA low > 73
Paraburkholderia graminis OAS925 0.55 ABIE53_003418 two-component system response regulator QseB 0.69 ABIE53_003272 glutathione transport system ATP-binding protein low > 113
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS16220 transcriptional regulator 0.69 BPHYT_RS15540 glutathione ABC transporter ATP-binding protein — —
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_04180 two component transcriptional regulator, winged helix family 0.69 H281DRAFT_04049 glutathione transport system ATP-binding protein low > 103
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS02475 response regulator 0.68 QEN71_RS16865 dipeptide ABC transporter ATP-binding protein low > 153
Herbaspirillum seropedicae SmR1 0.51 HSERO_RS21985 transcriptional regulator 0.66 HSERO_RS09190 ABC transporter ATP-binding protein low > 78
Variovorax sp. SCN45 0.51 GFF1175 Two-component system response regulator QseB 0.69 GFF1215 Oligopeptide transport ATP-binding protein @ Glutathione ABC transporter, ATP-binding protein GsiA low > 127
Variovorax sp. OAS795 0.50 ABID97_RS14955 response regulator 0.69 ABID97_RS15410 dipeptide ABC transporter ATP-binding protein low > 91
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS37390 XRE family transcriptional regulator 0.71 RR42_RS11995 glutathione ABC transporter ATP-binding protein low > 128
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS22890 response regulator transcription factor 0.70 ABZR87_RS11705 dipeptide ABC transporter ATP-binding protein low > 80
Ralstonia solanacearum GMI1000 0.48 RS_RS24590 DNA-binding response regulator 0.69 RS_RS06915 ABC transporter ATP-binding protein low > 80
Ralstonia solanacearum PSI07 0.47 RPSI07_RS07290 DNA-binding response regulator 0.70 RPSI07_RS17240 ABC transporter ATP-binding protein low > 81
Ralstonia solanacearum UW163 0.46 UW163_RS17155 DNA-binding response regulator 0.69 UW163_RS13570 glutathione ABC transporter ATP-binding protein — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS16415 DNA-binding response regulator 0.69 RALBFv3_RS00240 glutathione ABC transporter ATP-binding protein low > 76

Not shown: 30 genomes with orthologs for HER17_RS21560 only; 7 genomes with orthologs for HER17_RS13510 only