Conservation of cofitness between HER17_RS15240 and HER17_RS12550 in Pectobacterium carotovorum WPP14

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS15240 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 1.0 HER17_RS12550 ABC transporter permease 0.64 1
Dickeya dianthicola ME23 0.98 DZA65_RS06565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 DZA65_RS09735 ABC transporter permease low > 75
Dickeya dadantii 3937 0.98 DDA3937_RS06175 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.82 DDA3937_RS09410 ABC transporter permease
Dickeya dianthicola 67-19 0.97 HGI48_RS06220 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.81 HGI48_RS09425 ABC transporter permease subunit
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF4549 LSU m3Psi1915 methyltransferase RlmH 0.69 GFF4418 Methionine ABC transporter permease protein low > 78
Klebsiella michiganensis M5al 0.90 BWI76_RS08040 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.38 BWI76_RS16665 ABC transporter permease low > 92
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_4366 Protein of unknown function DUF163 0.39 Psyr_0282 Binding-protein-dependent transport systems inner membrane component
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_4366 Protein of unknown function DUF163 0.39 Psyr_0282 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas stutzeri RCH2 0.61 Psest_0511 rRNA large subunit m3Psi methyltransferase RlmH 0.31 Psest_4315 ABC-type metal ion transport system, permease component low > 67
Paraburkholderia graminis OAS925 0.50 ABIE53_001541 23S rRNA (pseudouridine1915-N3)-methyltransferase 0.42 ABIE53_004101 D-methionine transport system permease protein
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS02695 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.36 LRK54_RS14730 ABC transporter permease low > 59
Rhodanobacter denitrificans MT42 0.50 LRK55_RS02450 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.36 LRK55_RS14445 methionine ABC transporter permease low > 63
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_04517 23S rRNA (pseudouridine1915-N3)-methyltransferase 0.42 H281DRAFT_03195 D-methionine transport system permease protein 0.27 67
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS17780 50S rRNA methyltransferase 0.42 HSERO_RS04975 methionine ABC transporter permease low > 78
Acinetobacter radioresistens SK82 0.48 MPMX26_02301 Ribosomal RNA large subunit methyltransferase H 0.37 MPMX26_01874 D-methionine transport system permease protein MetI low > 36
Variovorax sp. OAS795 0.48 ABID97_RS16715 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.39 ABID97_RS21740 methionine ABC transporter permease low > 91
Variovorax sp. SCN45 0.48 GFF298 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177) 0.38 GFF3113 Methionine ABC transporter permease protein low > 127
Ralstonia solanacearum GMI1000 0.46 RS_RS11015 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.44 RS_RS04580 ABC transporter permease
Dechlorosoma suillum PS 0.45 Dsui_0451 hypothetical protein 0.42 Dsui_2067 ABC-type metal ion transport system, permease component low > 51
Rhizobium sp. OAE497 0.27 ABIE40_RS18965 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.37 ABIE40_RS23110 methionine ABC transporter permease low > 107
Fusobacterium nucleatum SB010 0.27 HUW76_07715 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.43 HUW76_06265 ABC transporter permease low > 35
Azospirillum brasilense Sp245 0.26 AZOBR_RS04060 50S rRNA methyltransferase 0.39 AZOBR_RS19470 DL-methionine transporter permease subunit
Caulobacter crescentus NA1000 Δfur 0.25 CCNA_03546 rRNA large subunit methyltransferase 0.32 CCNA_02750 ABC transporter permease protein low > 67
Caulobacter crescentus NA1000 0.25 CCNA_03546 rRNA large subunit methyltransferase 0.32 CCNA_02750 ABC transporter permease protein low > 66
Bifidobacterium breve UCC2003 0.23 BBR_RS19685 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.29 BBR_RS14455 ABC transporter permease low > 34

Not shown: 72 genomes with orthologs for HER17_RS15240 only; 0 genomes with orthologs for HER17_RS12550 only