Conservation of cofitness between HER17_RS18005 and HER17_RS09765 in Pectobacterium carotovorum WPP14

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS18005 glycine cleavage system aminomethyltransferase GcvT 1.0 HER17_RS09765 nitrate/nitrite two-component system sensor histidine kinase NarX 0.56 19
Dickeya dadantii 3937 0.82 DDA3937_RS03245 glycine cleavage system aminomethyltransferase GcvT 0.67 DDA3937_RS11945 nitrate/nitrite two-component system sensor histidine kinase NarX low > 74
Dickeya dianthicola 67-19 0.82 HGI48_RS03390 glycine cleavage system aminomethyltransferase GcvT 0.65 HGI48_RS12035 nitrate/nitrite two-component system sensor histidine kinase NarX low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS03435 glycine cleavage system aminomethyltransferase GcvT 0.65 DZA65_RS12485 nitrate/nitrite two-component system sensor histidine kinase NarX low > 75
Serratia liquefaciens MT49 0.81 IAI46_20860 glycine cleavage system aminomethyltransferase GcvT 0.57 IAI46_15605 nitrate/nitrite two-component system sensor histidine kinase NarX low > 86
Rahnella sp. WP5 0.81 EX31_RS21510 glycine cleavage system aminomethyltransferase GcvT 0.49 EX31_RS06555 nitrate/nitrite two-component system sensor histidine kinase NarX low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF3005 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.50 GFF2764 Nitrate/nitrite sensor protein (EC 2.7.3.-) low > 78
Enterobacter sp. TBS_079 0.78 MPMX20_03764 Aminomethyltransferase 0.51 MPMX20_02617 Nitrate/nitrite sensor protein NarX low > 85
Escherichia coli Nissle 1917 0.78 ECOLIN_RS16175 glycine cleavage system aminomethyltransferase GcvT 0.52 ECOLIN_RS07380 nitrate/nitrite two-component system sensor histidine kinase NarX — —
Klebsiella michiganensis M5al 0.78 BWI76_RS23880 Aminomethyltransferase (EC 2.1.2.10) (from data) 0.51 BWI76_RS17345 nitrate/nitrite two-component system sensor histidine kinase NarX low > 92
Escherichia coli ECRC62 0.78 BNILDI_09970 gcvT glycine cleavage system aminomethyltransferase GcvT 0.52 BNILDI_18680 narX nitrate/nitrite two-component system sensor histidine kinase NarX low > 75
Escherichia coli BW25113 0.78 b2905 gcvT glycine cleavage system aminomethyltransferase T (NCBI) 0.52 b1222 narX sensory histidine kinase in two-component regulatory system with NarL (NCBI) 0.33 15
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_00810 Aminomethyltransferase 0.51 OHPLBJKB_02462 Nitrate/nitrite sensor protein NarX low > 73
Escherichia coli BL21 0.78 ECD_02737 aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex 0.52 ECD_01200 sensory histidine kinase in two-component regulatory system with NarL low > 61
Escherichia coli ECOR27 0.78 NOLOHH_11435 gcvT glycine cleavage system aminomethyltransferase GcvT 0.52 NOLOHH_20530 narX nitrate/nitrite two-component system sensor histidine kinase NarX low > 75
Escherichia fergusonii Becca 0.77 EFB2_00997 Aminomethyltransferase 0.52 EFB2_02704 Nitrate/nitrite sensor protein NarX low > 86
Escherichia coli ECOR38 0.77 HEPCGN_18810 gcvT glycine cleavage system aminomethyltransferase GcvT 0.51 HEPCGN_24985 narX nitrate/nitrite two-component system sensor histidine kinase NarX low > 87
Enterobacter asburiae PDN3 0.77 EX28DRAFT_2957 glycine cleavage system T protein 0.51 EX28DRAFT_0849 Signal transduction histidine kinase, nitrate/nitrite-specific low > 76
Escherichia coli ECRC99 0.77 KEDOAH_08620 gcvT glycine cleavage system aminomethyltransferase GcvT 0.52 KEDOAH_25520 narX nitrate/nitrite two-component system sensor histidine kinase NarX — —
Escherichia coli ECRC100 0.77 OKFHMN_19520 gcvT glycine cleavage system aminomethyltransferase GcvT 0.52 OKFHMN_28525 narX nitrate/nitrite two-component system sensor histidine kinase NarX low > 80
Escherichia coli ECRC98 0.77 JDDGAC_23160 gcvT glycine cleavage system aminomethyltransferase GcvT 0.52 JDDGAC_06050 narX nitrate/nitrite two-component system sensor histidine kinase NarX low > 86
Escherichia coli ECRC101 0.77 MCAODC_10040 gcvT glycine cleavage system aminomethyltransferase GcvT 0.52 MCAODC_21735 narX nitrate/nitrite two-component system sensor histidine kinase NarX low > 87
Escherichia coli ECRC102 0.77 NIAGMN_17285 gcvT glycine cleavage system aminomethyltransferase GcvT 0.52 NIAGMN_27710 narX nitrate/nitrite two-component system sensor histidine kinase NarX — —
Pseudomonas stutzeri RCH2 0.57 Psest_0181 glycine cleavage system T protein 0.24 Psest_3490 Signal transduction histidine kinase, nitrate/nitrite-specific low > 67
Pseudomonas simiae WCS417 0.53 PS417_27255 glycine cleavage system protein T 0.20 PS417_15735 histidine kinase low > 88
Pseudomonas sp. RS175 0.53 PFR28_04316 Aminomethyltransferase 0.20 PFR28_01629 Nitrate/nitrite sensor protein NarX low > 88
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_08735 glycine cleavage system protein T 0.21 AO353_22080 histidine kinase low > 101
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_4485 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.21 Pf6N2E2_726 Nitrate/nitrite sensor protein (EC 2.7.3.-) low > 103
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_13035 glycine cleavage system protein T 0.21 AO356_25190 histidine kinase low > 104
Ralstonia solanacearum GMI1000 0.46 RS_RS16500 aminomethyltransferase 0.12 RS_RS21840 nitrate/nitrite sensor histidine kinase low > 80
Ralstonia solanacearum UW163 0.46 UW163_RS04960 glycine cleavage system protein T 0.13 UW163_RS18120 histidine kinase — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS08650 glycine cleavage system protein T 0.13 RALBFv3_RS16765 histidine kinase low > 76
Ralstonia solanacearum PSI07 0.46 RPSI07_RS08585 glycine cleavage system protein T 0.13 RPSI07_RS06680 HAMP domain-containing protein low > 81
Paraburkholderia graminis OAS925 0.45 ABIE53_000236 aminomethyltransferase 0.13 ABIE53_005344 two-component system nitrate/nitrite sensor histidine kinase NarX low > 113
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS20060 glycine cleavage system protein T 0.13 RR42_RS08900 histidine kinase low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF5213 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.10 GFF5822 Nitrate/nitrite sensor protein (EC 2.7.3.-) low > 90
Acidovorax sp. GW101-3H11 0.20 Ac3H11_165 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.13 Ac3H11_4488 Nitrate/nitrite sensor protein (EC 2.7.3.-) low > 79

Not shown: 58 genomes with orthologs for HER17_RS18005 only; 2 genomes with orthologs for HER17_RS09765 only