Conservation of cofitness between HER17_RS16015 and HER17_RS08175 in Pectobacterium carotovorum WPP14

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS16015 proline-specific permease ProY 1.0 HER17_RS08175 flagellar hook assembly protein FlgD 0.65 17
Dickeya dianthicola ME23 0.88 DZA65_RS05835 proline-specific permease ProY 0.67 DZA65_RS14000 flagellar hook assembly protein FlgD 0.46 64
Dickeya dianthicola 67-19 0.88 HGI48_RS05510 proline-specific permease ProY 0.67 HGI48_RS13515 flagellar hook assembly protein FlgD low > 71
Rahnella sp. WP5 0.85 EX31_RS22070 proline-specific permease ProY 0.55 EX31_RS11305 flagellar hook assembly protein FlgD low > 89
Pantoea sp. MT58 0.83 IAI47_14830 proline-specific permease ProY 0.60 IAI47_12155 flagellar hook assembly protein FlgD low > 76
Serratia liquefaciens MT49 0.83 IAI46_04800 proline-specific permease ProY 0.63 IAI46_15950 flagellar hook assembly protein FlgD low > 86
Dickeya dadantii 3937 0.82 DDA3937_RS05450 proline-specific permease ProY 0.66 DDA3937_RS13470 flagellar hook assembly protein FlgD low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF4300 Proline-specific permease proY 0.58 GFF3356 Flagellar basal-body rod modification protein FlgD low > 78
Enterobacter asburiae PDN3 0.81 EX28DRAFT_2572 Gamma-aminobutyrate permease and related permeases 0.56 EX28DRAFT_1857 Flagellar hook capping protein low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_00989 Proline-specific permease ProY 0.57 MPMX20_01754 Basal-body rod modification protein FlgD low > 85
Escherichia coli ECOR38 0.78 HEPCGN_07170 proY proline-specific permease ProY 0.60 HEPCGN_23825 flgD flagellar hook assembly protein FlgD low > 87
Escherichia coli ECRC102 0.78 NIAGMN_06585 proY proline-specific permease ProY 0.58 NIAGMN_24165 flgD flagellar hook assembly protein FlgD — —
Escherichia coli ECRC101 0.78 MCAODC_27755 proY proline-specific permease ProY 0.58 MCAODC_23025 flgD flagellar hook assembly protein FlgD low > 87
Escherichia fergusonii Becca 0.78 EFB2_03655 Proline-specific permease ProY 0.58 EFB2_02899 Basal-body rod modification protein FlgD low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_03274 Proline-specific permease ProY 0.58 OHPLBJKB_02590 Basal-body rod modification protein FlgD low > 73
Escherichia coli ECRC99 0.78 KEDOAH_19435 proY proline-specific permease ProY 0.58 KEDOAH_24090 flgD flagellar hook assembly protein FlgD — —
Escherichia coli ECRC62 0.78 BNILDI_22875 proY proline-specific permease ProY 0.58 BNILDI_19355 flgD flagellar hook assembly protein FlgD low > 75
Escherichia coli ECRC98 0.78 JDDGAC_12185 proY proline-specific permease ProY 0.58 JDDGAC_07325 flgD flagellar hook assembly protein FlgD low > 86
Escherichia coli BL21 0.78 ECD_00350 proline-specific permease 0.58 ECD_01071 flagellar hook assembly protein low > 61
Escherichia coli BW25113 0.78 b0402 proY predicted cryptic proline transporter (NCBI) 0.58 b1075 flgD flagellar basal body rod modification protein D (NCBI) low > 76
Escherichia coli ECRC100 0.78 OKFHMN_08530 proY proline-specific permease ProY 0.58 OKFHMN_03665 flgD flagellar hook assembly protein FlgD low > 80
Escherichia coli ECOR27 0.78 NOLOHH_01460 proY proline-specific permease ProY 0.58 NOLOHH_21195 flgD flagellar hook assembly protein FlgD low > 75
Escherichia coli Nissle 1917 0.78 ECOLIN_RS02425 proline-specific permease ProY 0.57 ECOLIN_RS06225 flagellar hook assembly protein FlgD low > 55
Erwinia tracheiphila SCR3 0.72 LU632_RS18885 proY proline-specific permease ProY 0.50 LU632_RS10405 flgD flagellar hook assembly protein FlgD low > 74
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_4834 histidine:proton symporter, AAT family 0.25 Psyr_3479 Flagellar hook capping protein low > 86
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_4834 histidine:proton symporter, AAT family 0.25 Psyr_3479 Flagellar hook capping protein low > 86
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS14635 proline-specific permease 0.39 RR42_RS35715 flagellar basal body rod modification protein FlgD low > 128
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_1580 Histidine transport protein (permease) 0.23 Pf1N1B4_3474 Flagellar basal-body rod modification protein FlgD low > 87
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_318 Histidine transport protein (permease) 0.27 PfGW456L13_2003 Flagellar basal-body rod modification protein FlgD low > 87
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS09765 amino acid permease 0.32 ABZR87_RS22280 flagellar hook assembly protein FlgD low > 80
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS05185 amino acid permease 0.23 ABZR86_RS20085 flagellar hook capping FlgD N-terminal domain-containing protein low > 74
Pseudomonas sp. RS175 0.56 PFR28_03490 Proline-specific permease ProY 0.28 PFR28_03252 Basal-body rod modification protein FlgD low > 88
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_17670 L-alanine and D-alanine permease (from data) 0.26 AO356_18925 flagellar biosynthesis protein FlgD low > 104
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_5459 D-serine/D-alanine/glycine transporter 0.26 Pf6N2E2_5696 Flagellar basal-body rod modification protein FlgD low > 103
Rhodanobacter denitrificans MT42 0.53 LRK55_RS02640 amino acid permease 0.22 LRK55_RS13155 flagellar hook capping FlgD N-terminal domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS02890 amino acid permease 0.23 LRK54_RS13415 flagellar hook capping protein low > 59
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_09870 Amino acid permease 0.21 OKGIIK_02660 Basal-body rod modification protein FlgD low > 52
Brevundimonas sp. GW460-12-10-14-LB2 0.10 A4249_RS06560 amino acid permease 0.16 A4249_RS08630 flagellar hook capping FlgD N-terminal domain-containing protein low > 48

Not shown: 6 genomes with orthologs for HER17_RS16015 only; 24 genomes with orthologs for HER17_RS08175 only