Conservation of cofitness between HER17_RS12300 and HER17_RS08120 in Pectobacterium carotovorum WPP14

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12300 formate transporter FocA 1.0 HER17_RS08120 chemotaxis response regulator protein-glutamate methylesterase 0.86 20
Dickeya dianthicola ME23 0.88 DZA65_RS09980 formate transporter FocA 0.95 DZA65_RS14055 chemotaxis response regulator protein-glutamate methylesterase low > 75
Serratia liquefaciens MT49 0.88 IAI46_08615 formate transporter FocA 0.90 IAI46_16015 chemotaxis response regulator protein-glutamate methylesterase low > 86
Dickeya dadantii 3937 0.88 DDA3937_RS09660 formate transporter FocA 0.95 DDA3937_RS13525 chemotaxis response regulator protein-glutamate methylesterase low > 74
Dickeya dianthicola 67-19 0.87 HGI48_RS09670 formate transporter FocA 0.95 HGI48_RS13570 chemotaxis response regulator protein-glutamate methylesterase low > 71
Rahnella sp. WP5 0.85 EX31_RS18265 formate transporter FocA 0.89 EX31_RS11360 chemotaxis response regulator protein-glutamate methylesterase low > 89
Escherichia coli BW25113 0.83 b0904 focA formate transporter (NCBI) 0.85 b1883 cheB chemotaxis-specific methylesterase (NCBI) low > 76
Escherichia coli Nissle 1917 0.83 ECOLIN_RS04790 formate transporter FocA 0.86 ECOLIN_RS10755 protein-glutamate methylesterase/protein glutamine deamidase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_02764 putative formate transporter 1 0.86 OHPLBJKB_01845 Chemotaxis response regulator protein-glutamate methylesterase low > 73
Escherichia coli BL21 0.83 ECD_00908 formate channel 0.86 ECD_01854 fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA low > 61
Escherichia coli ECRC101 0.83 MCAODC_24895 focA formate transporter FocA 0.86 MCAODC_19255 cheB protein-glutamate methylesterase/protein glutamine deamidase low > 87
Escherichia coli ECRC100 0.83 OKFHMN_05505 focA formate transporter FocA 0.86 OKFHMN_26150 cheB protein-glutamate methylesterase/protein glutamine deamidase low > 80
Escherichia coli ECRC62 0.83 BNILDI_20320 focA formate transporter FocA 0.86 BNILDI_15380 cheB protein-glutamate methylesterase/protein glutamine deamidase low > 75
Escherichia coli ECOR27 0.83 NOLOHH_22065 focA formate transporter FocA 0.86 NOLOHH_16590 cheB protein-glutamate methylesterase/protein glutamine deamidase low > 75
Escherichia coli ECRC102 0.83 NIAGMN_03225 focA formate transporter FocA 0.86 NIAGMN_01910 cheB protein-glutamate methylesterase/protein glutamine deamidase — —
Escherichia coli ECRC99 0.83 KEDOAH_22230 focA formate transporter FocA 0.86 KEDOAH_01955 cheB protein-glutamate methylesterase/protein glutamine deamidase — —
Escherichia coli ECRC98 0.83 JDDGAC_09115 focA formate transporter FocA 0.86 JDDGAC_00725 cheB protein-glutamate methylesterase/protein glutamine deamidase low > 86
Erwinia tracheiphila SCR3 0.80 LU632_RS09780 focA formate transporter FocA 0.85 LU632_RS13525 chemotaxis response regulator protein-glutamate methylesterase low > 74
Pantoea sp. MT58 0.80 IAI47_12875 formate transporter FocA 0.86 IAI47_08330 chemotaxis response regulator protein-glutamate methylesterase low > 76
Enterobacter sp. TBS_079 0.78 MPMX20_01563 putative formate transporter 1 0.86 MPMX20_02787 Protein-glutamate methylesterase/protein-glutamine glutaminase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF3661 Formate efflux transporter (TC 2.A.44 family) 0.85 GFF1664 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) low > 78
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_08525 formate transporter FocA 0.44 CSW01_19520 chemotaxis response regulator protein-glutamate methylesterase low > 62
Azospirillum sp. SherDot2 0.36 MPMX19_02844 putative formate transporter 1 0.48 MPMX19_06748 Protein-glutamate methylesterase/protein-glutamine glutaminase of group 3 operon low > 112
Azospirillum brasilense Sp245 0.35 AZOBR_RS30145 formate transporter 0.47 AZOBR_RS14260 chemotaxis protein low > 97
Bosea sp. OAE506 0.27 ABIE41_RS15280 formate/nitrite transporter family protein 0.45 ABIE41_RS01665 chemotaxis response regulator protein-glutamate methylesterase low > 77
Pseudomonas syringae pv. syringae B728a ΔmexB 0.24 Psyr_4660 Formate/nitrite transporter 0.47 Psyr_0781 Protein-glutamate methylesterase low > 86
Pseudomonas syringae pv. syringae B728a 0.24 Psyr_4660 Formate/nitrite transporter 0.47 Psyr_0781 Protein-glutamate methylesterase low > 86
Methanococcus maripaludis JJ 0.18 MMJJ_RS07650 formate/nitrite transporter family protein 0.41 MMJJ_RS00330 chemotaxis response regulator protein-glutamate methylesterase low > 28
Methanococcus maripaludis S2 0.18 MMP_RS06705 formate/nitrite transporter family protein 0.41 MMP_RS04805 chemotaxis response regulator protein-glutamate methylesterase low > 25
Alteromonas macleodii MIT1002 0.16 MIT1002_01529 Formate channel 1 0.32 MIT1002_01107 Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon low > 70
Pseudomonas sp. S08-1 0.14 OH686_20565 Nitrite transporter from formate/nitrite family 0.44 OH686_21840 Chemotaxis response regulator protein-glutamate methylesterase CheB low > 80
Rhodopseudomonas palustris CGA009 0.13 TX73_016555 formate/nitrite transporter family protein 0.51 TX73_000705 chemotaxis response regulator protein-glutamate methylesterase low > 86
Castellaniella sp019104865 MT123 0.13 ABCV34_RS06885 formate/nitrite transporter family protein 0.67 ABCV34_RS05815 chemotaxis response regulator protein-glutamate methylesterase low > 48
Marinobacter adhaerens HP15 0.13 HP15_3885 formate and nitrite transporter 0.28 HP15_2297 response regulator receiver modulated CheB methylesterase low > 73
Pseudomonas stutzeri RCH2 0.13 Psest_2408 Formate/nitrite family of transporters 0.47 Psest_0653 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain — —

Not shown: 3 genomes with orthologs for HER17_RS12300 only; 50 genomes with orthologs for HER17_RS08120 only