Conservation of cofitness between HER17_RS16015 and HER17_RS07185 in Pectobacterium carotovorum WPP14

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS16015 proline-specific permease ProY 1.0 HER17_RS07185 NADH-quinone oxidoreductase subunit NuoN 0.68 11
Dickeya dianthicola ME23 0.88 DZA65_RS05835 proline-specific permease ProY 0.87 DZA65_RS14925 NADH-quinone oxidoreductase subunit NuoN — —
Dickeya dianthicola 67-19 0.88 HGI48_RS05510 proline-specific permease ProY 0.87 HGI48_RS14250 NADH-quinone oxidoreductase subunit NuoN — —
Rahnella sp. WP5 0.85 EX31_RS22070 proline-specific permease ProY 0.87 EX31_RS19375 NADH-quinone oxidoreductase subunit NuoN low > 89
Pantoea sp. MT58 0.83 IAI47_14830 proline-specific permease ProY 0.85 IAI47_06420 NADH-quinone oxidoreductase subunit NuoN low > 76
Serratia liquefaciens MT49 0.83 IAI46_04800 proline-specific permease ProY 0.87 IAI46_17650 NADH-quinone oxidoreductase subunit NuoN low > 86
Dickeya dadantii 3937 0.82 DDA3937_RS05450 proline-specific permease ProY 0.87 DDA3937_RS14275 NADH-quinone oxidoreductase subunit NuoN — —
Klebsiella michiganensis M5al 0.82 BWI76_RS06245 proline-specific permease ProY 0.83 BWI76_RS20130 NADH-quinone oxidoreductase subunit N low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF4300 Proline-specific permease proY 0.82 GFF1879 NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) low > 78
Enterobacter asburiae PDN3 0.81 EX28DRAFT_2572 Gamma-aminobutyrate permease and related permeases 0.83 EX28DRAFT_0334 proton-translocating NADH-quinone oxidoreductase, chain N low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_00989 Proline-specific permease ProY 0.84 MPMX20_03206 NADH-quinone oxidoreductase subunit N low > 85
Escherichia coli ECOR38 0.78 HEPCGN_07170 proY proline-specific permease ProY 0.83 HEPCGN_22105 nuoN NADH-quinone oxidoreductase subunit NuoN 0.50 79
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_03274 Proline-specific permease ProY 0.83 OHPLBJKB_01430 NADH-quinone oxidoreductase subunit N low > 73
Escherichia coli BW25113 0.78 b0402 proY predicted cryptic proline transporter (NCBI) 0.83 b2276 nuoN NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) low > 76
Escherichia coli ECRC100 0.78 OKFHMN_08530 proY proline-specific permease ProY 0.83 OKFHMN_22900 nuoN NADH-quinone oxidoreductase subunit NuoN low > 80
Escherichia fergusonii Becca 0.78 EFB2_03655 Proline-specific permease ProY 0.83 EFB2_01583 NADH-quinone oxidoreductase subunit N low > 86
Escherichia coli Nissle 1917 0.78 ECOLIN_RS02425 proline-specific permease ProY 0.83 ECOLIN_RS13225 NADH-quinone oxidoreductase subunit NuoN low > 55
Escherichia coli BL21 0.78 ECD_00350 proline-specific permease 0.83 ECD_02201 NADH:ubiquinone oxidoreductase, membrane subunit N low > 61
Escherichia coli ECRC101 0.78 MCAODC_27755 proY proline-specific permease ProY 0.83 MCAODC_13940 nuoN NADH-quinone oxidoreductase subunit NuoN low > 87
Escherichia coli ECRC99 0.78 KEDOAH_19435 proY proline-specific permease ProY 0.83 KEDOAH_05295 nuoN NADH-quinone oxidoreductase subunit NuoN — —
Escherichia coli ECRC62 0.78 BNILDI_22875 proY proline-specific permease ProY 0.83 BNILDI_13440 nuoN NADH-quinone oxidoreductase subunit NuoN low > 75
Escherichia coli ECRC98 0.78 JDDGAC_12185 proY proline-specific permease ProY 0.83 JDDGAC_26865 nuoN NADH-quinone oxidoreductase subunit NuoN low > 86
Escherichia coli ECRC102 0.78 NIAGMN_06585 proY proline-specific permease ProY 0.83 NIAGMN_20670 nuoN NADH-quinone oxidoreductase subunit NuoN — —
Escherichia coli ECOR27 0.78 NOLOHH_01460 proY proline-specific permease ProY 0.83 NOLOHH_14520 nuoN NADH-quinone oxidoreductase subunit NuoN low > 75
Erwinia tracheiphila SCR3 0.72 LU632_RS18885 proY proline-specific permease ProY 0.85 LU632_RS08025 nuoN NADH-quinone oxidoreductase subunit NuoN low > 74
Pseudomonas simiae WCS417 0.64 PS417_01755 proline-specific permease 0.58 PS417_16635 NADH:ubiquinone oxidoreductase subunit N — —
Pseudomonas fluorescens SBW25 0.64 PFLU_RS01810 amino acid permease 0.58 PFLU_RS18675 NADH-quinone oxidoreductase subunit NuoN low > 109
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS01810 amino acid permease 0.58 PFLU_RS18675 NADH-quinone oxidoreductase subunit NuoN low > 109
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_4834 histidine:proton symporter, AAT family 0.57 Psyr_3209 NADH dehydrogenase subunit N — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_4834 histidine:proton symporter, AAT family 0.57 Psyr_3209 NADH dehydrogenase subunit N low > 86
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_1580 Histidine transport protein (permease) 0.59 Pf1N1B4_4028 NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) low > 87
Pseudomonas putida KT2440 0.63 PP_5031 proline (histidine) APC transporter 0.57 PP_4131 NADH-quinone oxidoreductase subunit N low > 96
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_12275 histidine permease (from data) 0.60 AO353_27800 NADH:ubiquinone oxidoreductase subunit N — —
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_318 Histidine transport protein (permease) 0.59 PfGW456L13_2621 NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) — —
Pseudomonas sp. RS175 0.56 PFR28_03490 Proline-specific permease ProY 0.60 PFR28_02639 NADH-quinone oxidoreductase subunit N — —
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_17670 L-alanine and D-alanine permease (from data) 0.60 AO356_22010 NADH:ubiquinone oxidoreductase subunit N — —
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_5459 D-serine/D-alanine/glycine transporter 0.60 Pf6N2E2_265 NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) — —
Rhodanobacter denitrificans MT42 0.53 LRK55_RS02640 amino acid permease 0.22 LRK55_RS00840 NADH-quinone oxidoreductase subunit NuoN — —
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS02890 amino acid permease 0.22 LRK54_RS01065 NADH-quinone oxidoreductase subunit NuoN — —
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_09870 Amino acid permease 0.22 OKGIIK_05830 nuoN NADH-quinone oxidoreductase subunit NuoN — —

Not shown: 4 genomes with orthologs for HER17_RS16015 only; 27 genomes with orthologs for HER17_RS07185 only