Conservation of cofitness between HER17_RS12030 and HER17_RS05670 in Pectobacterium carotovorum WPP14

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12030 aspartate/tyrosine/aromatic aminotransferase 1.0 HER17_RS05670 sulfate ABC transporter substrate-binding protein 0.91 9
Serratia liquefaciens MT49 0.88 IAI46_08750 aspartate/tyrosine/aromatic aminotransferase 0.57 IAI46_24640 sulfate ABC transporter substrate-binding protein low > 86
Escherichia coli ECRC62 0.87 BNILDI_20195 aspC aspartate transaminase 0.60 BNILDI_05575 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 75
Escherichia coli ECOR38 0.87 HEPCGN_23140 aspC aspartate transaminase 0.60 HEPCGN_12465 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 87
Escherichia coli BW25113 0.87 b0928 aspC aspartate aminotransferase, PLP-dependent (NCBI) 0.60 b3917 sbp sulfate transporter subunit (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_02738 Aspartate aminotransferase 0.60 OHPLBJKB_04134 Sulfate-binding protein low > 73
Escherichia coli ECOR27 0.87 NOLOHH_21940 aspC aspartate transaminase 0.60 NOLOHH_05955 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 75
Escherichia coli BL21 0.87 ECD_00932 aspartate aminotransferase, PLP-dependent 0.60 ECD_03802 sulfate transporter subunit — —
Escherichia coli Nissle 1917 0.86 ECOLIN_RS04910 aspartate transaminase 0.60 ECOLIN_RS22565 sulfate/thiosulfate ABC transporter substrate-binding protein Sbp — —
Rahnella sp. WP5 0.86 EX31_RS18145 aspartate/tyrosine/aromatic aminotransferase 0.54 EX31_RS14305 sulfate ABC transporter substrate-binding protein low > 89
Escherichia fergusonii Becca 0.86 EFB2_03136 Aspartate aminotransferase 0.60 EFB2_04701 Sulfate-binding protein low > 86
Escherichia coli ECRC102 0.86 NIAGMN_03105 aspC aspartate transaminase 0.59 NIAGMN_11575 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp — —
Escherichia coli ECRC101 0.86 MCAODC_24775 aspC aspartate transaminase 0.59 MCAODC_04320 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 87
Escherichia coli ECRC100 0.86 OKFHMN_05385 aspC aspartate transaminase 0.59 OKFHMN_13820 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 80
Escherichia coli ECRC98 0.86 JDDGAC_08995 aspC aspartate transaminase 0.59 JDDGAC_17445 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 86
Escherichia coli ECRC99 0.86 KEDOAH_22350 aspC aspartate transaminase 0.59 KEDOAH_14340 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp — —
Klebsiella michiganensis M5al 0.86 BWI76_RS09870 aromatic amino acid aminotransferase 0.58 BWI76_RS27500 sulfate transporter subunit low > 92
Dickeya dianthicola 67-19 0.86 HGI48_RS12990 aspartate/tyrosine/aromatic aminotransferase 0.89 HGI48_RS15990 sulfate ABC transporter substrate-binding protein 0.78 24
Enterobacter sp. TBS_079 0.86 MPMX20_01586 Aspartate aminotransferase 0.59 MPMX20_04551 Sulfate-binding protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3685 Aspartate aminotransferase (EC 2.6.1.1) 0.59 GFF2284 Sulfate-binding protein Sbp low > 78
Dickeya dadantii 3937 0.85 DDA3937_RS12915 aspartate/tyrosine/aromatic aminotransferase 0.90 DDA3937_RS15850 sulfate ABC transporter substrate-binding protein low > 74
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2008 Aspartate/tyrosine/aromatic aminotransferase 0.60 EX28DRAFT_4391 sulfate/thiosulfate-binding protein low > 76
Dickeya dianthicola ME23 0.85 DZA65_RS13450 aspartate/tyrosine/aromatic aminotransferase 0.89 DZA65_RS17075 sulfate ABC transporter substrate-binding protein low > 75
Pantoea sp. MT58 0.84 IAI47_12765 aspartate/tyrosine/aromatic aminotransferase 0.58 IAI47_00785 sulfate ABC transporter substrate-binding protein 0.38 15
Erwinia tracheiphila SCR3 0.83 LU632_RS09905 aspartate/tyrosine/aromatic aminotransferase 0.56 LU632_RS21830 sulfate ABC transporter substrate-binding protein low > 74
Shewanella oneidensis MR-1 0.64 SO2350 aspC-1 aspartate aminotransferase (NCBI ptt file) 0.62 SO4652 sbp sulfate ABC transporter, periplasmic sulfate-binding protein (NCBI ptt file) low > 76
Castellaniella sp019104865 MT123 0.49 ABCV34_RS05115 amino acid aminotransferase 0.53 ABCV34_RS03935 sulfate ABC transporter substrate-binding protein — —
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.130.1 hypothetical protein 0.56 Xcc-8004.4087.1 Sulfate and thiosulfate binding protein CysP low > 74
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_13195 Aminotransferase 0.59 OKGIIK_10935 ABC transporter permease low > 52
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_03985 L-phenylalanine transaminase (EC 2.6.1.57) (from data) 0.62 AO356_10685 ABC transporter permease low > 104
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_2632 tyrosine aminotransferase (EC 2.6.1.57) (from data) 0.62 Pf6N2E2_4006 Sulfate and thiosulfate binding protein CysP low > 103
Pseudomonas simiae WCS417 0.46 PS417_19910 aromatic amino acid aminotransferase 0.62 PS417_00930 ABC transporter permease low > 88
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS21880 aspartate/tyrosine/aromatic aminotransferase 0.62 PFLU_RS00945 sulfate ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25 0.46 PFLU_RS21880 aspartate/tyrosine/aromatic aminotransferase 0.62 PFLU_RS00945 sulfate ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_4396 tyrosine aminotransferase (EC 2.6.1.57) (from data) 0.61 PfGW456L13_486 Sulfate and thiosulfate binding protein CysP low > 87
Pseudomonas sp. RS175 0.46 PFR28_00800 Aspartate aminotransferase 0.62 PFR28_04762 Sulfate-binding protein low > 88
Pseudomonas sp. S08-1 0.45 OH686_21225 Aspartate aminotransferase or Aromatic-amino-acid aminotransferase 0.68 OH686_11670 Sulfate and thiosulfate binding protein CysP low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_1973 Aspartate transaminase 0.64 Psyr_0084 extracellular solute-binding protein, family 1 low > 86
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_1973 Aspartate transaminase 0.64 Psyr_0084 extracellular solute-binding protein, family 1 low > 86
Sinorhizobium meliloti 1021 0.40 SMc00387 aromatic amino acid aminotransferase 0.59 SM_b21133 sulfate ABC transporter substrate-binding protein low > 103
Azospirillum sp. SherDot2 0.39 MPMX19_05266 Aspartate aminotransferase 0.67 MPMX19_04166 Sulfate-binding protein low > 112

Not shown: 11 genomes with orthologs for HER17_RS12030 only; 33 genomes with orthologs for HER17_RS05670 only