Conservation of cofitness between HER17_RS10320 and HER17_RS05550 in Pectobacterium carotovorum WPP14

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS10320 flavin reductase 1.0 HER17_RS05550 aspartate 1-decarboxylase 0.69 3
Serratia liquefaciens MT49 0.56 IAI46_09030 pyrimidine utilization flavin reductase protein F 0.92 IAI46_21250 aspartate 1-decarboxylase low > 86
Enterobacter sp. TBS_079 0.54 MPMX20_01694 FMN reductase (NADH) RutF 0.82 MPMX20_00825 Aspartate 1-decarboxylase low > 85
Enterobacter asburiae PDN3 0.54 EX28DRAFT_1919 pyrimidine utilization flavin reductase protein F 0.81 EX28DRAFT_3728 L-aspartate 1-decarboxylase (EC 4.1.1.11) low > 76
Escherichia fergusonii Becca 0.53 EFB2_03073 FMN reductase (NADH) RutF 0.82 EFB2_03914 Aspartate 1-decarboxylase low > 86
Escherichia coli Nissle 1917 0.53 ECOLIN_RS26450 NADH-dependent FMN reductase RutF 0.82 ECOLIN_RS00725 aspartate 1-decarboxylase — —
Escherichia coli BL21 0.53 ECD_01010 flavin:NADH reductase 0.82 ECD_00130 aspartate 1-decarboxylase — —
Escherichia coli ECRC98 0.53 JDDGAC_08250 rutF malonic semialdehyde reductase 0.82 JDDGAC_14010 panD aspartate 1-decarboxylase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_02659 FMN reductase (NADH) RutF 0.82 OHPLBJKB_03530 Aspartate 1-decarboxylase low > 73
Escherichia coli ECRC62 0.53 BNILDI_19705 rutF malonic semialdehyde reductase 0.82 BNILDI_08910 panD aspartate 1-decarboxylase low > 75
Escherichia coli ECOR38 0.53 HEPCGN_23500 rutF malonic semialdehyde reductase 0.82 HEPCGN_08395 panD aspartate 1-decarboxylase low > 87
Escherichia coli ECOR27 0.53 NOLOHH_21540 rutF malonic semialdehyde reductase 0.82 NOLOHH_02760 panD aspartate 1-decarboxylase low > 75
Escherichia coli ECRC99 0.53 KEDOAH_23105 rutF malonic semialdehyde reductase 0.82 KEDOAH_17740 panD aspartate 1-decarboxylase — —
Escherichia coli BW25113 0.53 b1007 b1007 orf, hypothetical protein (VIMSS) 0.82 b0131 panD aspartate 1-decarboxylase precursor (NCBI) low > 76
Escherichia coli ECRC102 0.53 NIAGMN_23695 rutF pyrimidine utilization flavin reductase protein F 0.82 NIAGMN_08265 panD aspartate 1-decarboxylase — —
Escherichia coli ECRC100 0.53 OKFHMN_04640 rutF pyrimidine utilization flavin reductase protein F 0.82 OKFHMN_10415 panD aspartate 1-decarboxylase low > 80
Escherichia coli ECRC101 0.53 MCAODC_24025 rutF pyrimidine utilization flavin reductase protein F 0.82 MCAODC_00930 panD aspartate 1-decarboxylase low > 87
Pantoea sp. MT58 0.52 IAI47_12530 pyrimidine utilization flavin reductase protein F 0.83 IAI47_15665 aspartate 1-decarboxylase low > 76
Klebsiella michiganensis M5al 0.51 BWI76_RS10755 pyrimidine utilization flavin reductase protein F 0.81 BWI76_RS04985 aspartate 1-decarboxylase low > 92
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS25005 FMN reductase 0.51 BPHYT_RS04920 aspartate 1-decarboxylase low > 109
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS07445 FMN reductase 0.56 HSERO_RS03485 aspartate decarboxylase — —
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS07485 4-hydroxyphenylacetate 3-monooxygenase, reductase component 0.50 QEN71_RS25070 aspartate 1-decarboxylase low > 153
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_3748 4-hydroxyphenylacetate 3-monooxygenase, reductase component (EC 1.6.8.-) 0.58 PfGW456L13_1519 Aspartate 1-decarboxylase (EC 4.1.1.11) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF3275 4-hydroxyphenylacetate 3-monooxygenase, reductase component (EC 1.6.8.-) 0.83 GFF93 Aspartate 1-decarboxylase (EC 4.1.1.11) low > 78
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_01660 4-hydroxyphenylacetate 3-monooxygenase reductase component (EC 1.14.13.3) 0.51 H281DRAFT_00149 L-aspartate 1-decarboxylase — —
Paraburkholderia graminis OAS925 0.32 ABIE53_004540 flavin reductase (NADH) 0.51 ABIE53_001259 aspartate 1-decarboxylase — —
Pseudomonas sp. RS175 0.24 PFR28_02021 FMN reductase (NADH) RutF 0.58 PFR28_03723 Aspartate 1-decarboxylase low > 88
Caulobacter crescentus NA1000 0.21 CCNA_02358 FMN reductase 0.52 CCNA_02380 aspartate 1-decarboxylase — —
Caulobacter crescentus NA1000 Δfur 0.21 CCNA_02358 FMN reductase 0.52 CCNA_02380 aspartate 1-decarboxylase low > 67
Azospirillum brasilense Sp245 0.21 AZOBR_RS20045 flavin reductase 0.35 AZOBR_RS18370 aspartate decarboxylase low > 97
Castellaniella sp019104865 MT123 0.20 ABCV34_RS06740 flavin reductase family protein 0.38 ABCV34_RS05880 aspartate 1-decarboxylase — —
Dechlorosoma suillum PS 0.19 Dsui_1004 conserved protein of DIM6/NTAB family 0.58 Dsui_1469 L-aspartate-alpha-decarboxylase — —
Acidovorax sp. GW101-3H11 0.16 Ac3H11_4854 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) 0.55 Ac3H11_3827 Aspartate 1-decarboxylase (EC 4.1.1.11) low > 79

Not shown: 13 genomes with orthologs for HER17_RS10320 only; 36 genomes with orthologs for HER17_RS05550 only