Conservation of cofitness between HER17_RS15910 and HER17_RS04235 in Pectobacterium carotovorum WPP14

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS15910 2-dehydropantoate 2-reductase 1.0 HER17_RS04235 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.89 11
Dickeya dianthicola ME23 0.79 DZA65_RS05940 2-dehydropantoate 2-reductase 0.79 DZA65_RS18090 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.81 26
Dickeya dadantii 3937 0.79 DDA3937_RS05555 2-dehydropantoate 2-reductase 0.80 DDA3937_RS16945 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.90 9
Dickeya dianthicola 67-19 0.79 HGI48_RS05615 2-dehydropantoate 2-reductase 0.79 HGI48_RS17015 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.82 14
Serratia liquefaciens MT49 0.69 IAI46_04950 2-dehydropantoate 2-reductase 0.78 IAI46_03685 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit low > 86
Enterobacter sp. TBS_079 0.63 MPMX20_01016 2-dehydropantoate 2-reductase 0.75 MPMX20_03643 Sulfite reductase [NADPH] flavoprotein alpha-component low > 85
Klebsiella michiganensis M5al 0.63 BWI76_RS06405 2-dehydropantoate 2-reductase 0.74 BWI76_RS22765 sulfite reductase subunit alpha low > 92
Enterobacter asburiae PDN3 0.63 EX28DRAFT_2546 2-dehydropantoate 2-reductase 0.77 EX28DRAFT_2853 sulfite reductase [NADPH] flavoprotein, alpha-component low > 76
Rahnella sp. WP5 0.63 EX31_RS22180 2-dehydropantoate 2-reductase 0.77 EX31_RS07905 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit low > 89
Escherichia coli ECOR38 0.63 HEPCGN_07025 panE 2-dehydropantoate 2-reductase 0.75 HEPCGN_19095 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit low > 87
Escherichia coli Nissle 1917 0.63 ECOLIN_RS02560 2-dehydropantoate 2-reductase 0.75 ECOLIN_RS15410 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit low > 55
Escherichia coli BL21 0.63 ECD_00373 2-dehydropantoate reductase, NADPH-specific 0.75 ECD_02609 sulfite reductase, alpha subunit, flavoprotein low > 61
Escherichia coli BW25113 0.63 b0425 panE 2-dehydropantoate 2-reductase (NCBI) 0.75 b2764 cysJ sulfite reductase, alpha subunit, flavoprotein (NCBI) low > 76
Escherichia fergusonii Becca 0.63 EFB2_03632 2-dehydropantoate 2-reductase 0.75 EFB2_01153 Sulfite reductase [NADPH] flavoprotein alpha-component low > 86
Escherichia coli ECOR27 0.62 NOLOHH_01345 panE 2-dehydropantoate 2-reductase 0.75 NOLOHH_12185 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit low > 75
Escherichia coli ECRC62 0.62 BNILDI_22760 panE 2-dehydropantoate 2-reductase 0.75 BNILDI_10735 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_03251 2-dehydropantoate 2-reductase 0.75 OHPLBJKB_00969 Sulfite reductase [NADPH] flavoprotein alpha-component low > 73
Escherichia coli ECRC100 0.61 OKFHMN_08395 panE 2-dehydropantoate 2-reductase 0.74 OKFHMN_20370 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit low > 80
Escherichia coli ECRC98 0.61 JDDGAC_12050 panE 2-dehydropantoate 2-reductase 0.74 JDDGAC_24035 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit low > 86
Escherichia coli ECRC102 0.61 NIAGMN_06450 panE 2-dehydropantoate 2-reductase 0.74 NIAGMN_18140 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit — —
Escherichia coli ECRC99 0.61 KEDOAH_19570 panE 2-dehydropantoate 2-reductase 0.74 KEDOAH_07755 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit — —
Escherichia coli ECRC101 0.61 MCAODC_27620 panE 2-dehydropantoate 2-reductase 0.74 MCAODC_10895 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit low > 87
Pantoea sp. MT58 0.61 IAI47_14715 2-dehydropantoate 2-reductase 0.78 IAI47_04150 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit low > 76
Erwinia tracheiphila SCR3 0.58 LU632_RS18455 panE 2-dehydropantoate 2-reductase 0.73 LU632_RS06400 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF4336 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.74 GFF4820 Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2) low > 78
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_11730 2-dehydropantoate 2-reductase 0.53 CSW01_02010 assimilatory sulfite reductase (NADPH) flavoprotein subunit low > 62
Pseudomonas stutzeri RCH2 0.25 Psest_1140 2-dehydropantoate 2-reductase 0.13 Psest_3345 Sulfite reductase, alpha subunit (flavoprotein) 0.21 54
Shewanella sp. ANA-3 0.25 Shewana3_0780 2-dehydropantoate 2-reductase (RefSeq) 0.48 Shewana3_0855 sulfite reductase (NADPH) alpha subunit (RefSeq) low > 73
Shewanella oneidensis MR-1 0.24 SO3817 panE 2-dehydropantoate 2-reductase (NCBI ptt file) 0.49 SO3738 cysJ sulfite reductase (NADPH) flavoprotein alpha-component (NCBI ptt file) 0.70 12
Shewanella amazonensis SB2B 0.22 Sama_2559 2-dehydropantoate 2-reductase (RefSeq) 0.49 Sama_2839 sulfite reductase subunit alpha (RefSeq) — —
Shewanella loihica PV-4 0.21 Shew_2895 2-dehydropantoate 2-reductase (RefSeq) 0.49 Shew_0665 sulfite reductase (NADPH) flavoprotein, alpha chain (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.20 MIT1002_01217 2-dehydropantoate 2-reductase 0.47 MIT1002_03380 Sulfite reductase [NADPH] flavoprotein alpha-component — —
Rhodanobacter denitrificans FW104-10B01 0.10 LRK54_RS03070 2-dehydropantoate 2-reductase 0.37 LRK54_RS00930 assimilatory sulfite reductase (NADPH) flavoprotein subunit low > 59
Rhodanobacter denitrificans MT42 0.10 LRK55_RS02820 2-dehydropantoate 2-reductase 0.37 LRK55_RS00705 assimilatory sulfite reductase (NADPH) flavoprotein subunit low > 63
Rhodanobacter sp. FW510-T8 0.09 OKGIIK_09940 panE 2-dehydropantoate 2-reductase 0.38 OKGIIK_05960 assimilatory sulfite reductase (NADPH) flavoprotein subunit low > 52

Not shown: 26 genomes with orthologs for HER17_RS15910 only; 8 genomes with orthologs for HER17_RS04235 only