Conservation of cofitness between HER17_RS12855 and HER17_RS00225 in Pectobacterium carotovorum WPP14

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12855 PTS fructose transporter subunit IIBC 1.0 HER17_RS00225 dipeptide ABC transporter permease DppB 0.70 17
Dickeya dadantii 3937 0.83 DDA3937_RS09240 PTS fructose transporter subunit IIBC 0.93 DDA3937_RS00465 dipeptide ABC transporter permease DppB low > 74
Dickeya dianthicola 67-19 0.83 HGI48_RS09270 PTS fructose transporter subunit IIBC 0.93 HGI48_RS20920 dipeptide ABC transporter permease DppB low > 71
Dickeya dianthicola ME23 0.83 DZA65_RS09575 PTS fructose transporter subunit IIBC 0.93 DZA65_RS21915 dipeptide ABC transporter permease DppB low > 75
Serratia liquefaciens MT49 0.77 IAI46_17230 PTS fructose transporter subunit IIBC 0.92 IAI46_00480 dipeptide ABC transporter permease DppB low > 86
Escherichia coli BL21 0.76 ECD_02096 fused fructose-specific PTS enzymes: IIBcomponent/IIC components 0.93 ECD_03394 dipeptide/heme ABC transporter permease low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_01543 'PTS system fructose-specific EIIB'BC component' transl_table=11 0.93 OHPLBJKB_00163 Dipeptide transport system permease protein DppB low > 73
Escherichia coli ECOR27 0.75 NOLOHH_15020 fruA PTS fructose transporter subunit IIBC 0.93 NOLOHH_08050 dppB dipeptide ABC transporter permease DppB low > 75
Escherichia coli ECRC62 0.75 BNILDI_13940 fruA PTS fructose transporter subunit IIBC 0.93 BNILDI_03510 dppB dipeptide ABC transporter permease DppB low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF3773 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) 0.93 GFF476 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) low > 78
Escherichia coli Nissle 1917 0.75 ECOLIN_RS12675 PTS fructose transporter subunit IIBC 0.93 ECOLIN_RS20270 dipeptide ABC transporter permease DppB
Escherichia coli ECOR38 0.75 HEPCGN_22710 fruA PTS fructose transporter subunit IIBC 0.93 HEPCGN_14970 dppB dipeptide ABC transporter permease DppB low > 87
Pantoea sp. MT58 0.75 IAI47_06660 PTS fructose transporter subunit IIBC 0.92 IAI47_18645 dipeptide ABC transporter permease DppB low > 76
Escherichia coli ECRC98 0.75 JDDGAC_27405 fruA PTS fructose transporter subunit IIBC 0.93 JDDGAC_19735 dppB dipeptide ABC transporter permease DppB low > 86
Escherichia fergusonii Becca 0.75 EFB2_01690 PTS system fructose-specific EIIB'BC component 0.93 EFB2_00264 Dipeptide transport system permease protein DppB low > 86
Escherichia coli ECRC100 0.75 OKFHMN_23445 fruA PTS fructose transporter subunit IIBC 0.93 OKFHMN_16105 dppB dipeptide ABC transporter permease DppB low > 80
Escherichia coli ECRC101 0.75 MCAODC_14495 fruA PTS fructose transporter subunit IIBC 0.93 MCAODC_06620 dppB dipeptide ABC transporter permease DppB low > 87
Enterobacter sp. TBS_079 0.75 MPMX20_03131 PTS system fructose-specific EIIB'BC component 0.93 MPMX20_00191 Dipeptide transport system permease protein DppB low > 85
Escherichia coli ECRC102 0.75 NIAGMN_21210 fruA PTS fructose transporter subunit IIBC 0.93 NIAGMN_13865 dppB dipeptide ABC transporter permease DppB
Escherichia coli ECRC99 0.75 KEDOAH_04740 fruA PTS fructose transporter subunit IIBC 0.93 KEDOAH_12045 dppB dipeptide ABC transporter permease DppB
Enterobacter asburiae PDN3 0.75 EX28DRAFT_0396 PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component 0.94 EX28DRAFT_3803 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components low > 76
Escherichia coli BW25113 0.75 b2167 fruA fused fructose-specific PTS enzymes: IIBcomponent/IIC components (NCBI) 0.93 b3543 dppB dipeptide ABC transporter, membrane subunit (DppB) (from data) low > 76
Klebsiella michiganensis M5al 0.74 BWI76_RS19725 PTS fructose transporter subunit EIIBC 0.94 BWI76_RS26880 dipeptide ABC transporter permease DppB low > 92
Rahnella sp. WP5 0.74 EX31_RS19065 PTS fructose transporter subunit IIBC 0.93 EX31_RS05510 dipeptide ABC transporter permease DppB low > 89
Erwinia tracheiphila SCR3 0.73 LU632_RS17315 fruA PTS fructose transporter subunit IIBC 0.92 LU632_RS00270 dppB dipeptide ABC transporter permease DppB low > 74
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_5073 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) 0.66 PfGW456L13_5055 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) low > 87
Pseudomonas sp. RS175 0.55 PFR28_00107 hypothetical protein 0.67 PFR28_00127 Dipeptide transport system permease protein DppB low > 88
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_0823 PTS system D-fructose-specific IIB component (F1P-forming), Frc family / PTS system D-fructose-specific IIC component (F1P-forming), Frc family 0.67 Psyr_4239 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_3337 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) 0.67 Pf6N2E2_3311 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_0823 PTS system D-fructose-specific IIB component (F1P-forming), Frc family / PTS system D-fructose-specific IIC component (F1P-forming), Frc family 0.67 Psyr_4239 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_1144 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) 0.66 Pf1N1B4_1124 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) low > 87
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_05475 PTS fructose transporter subunit IIBC 0.67 AO353_05395 peptide ABC transporter permease low > 101
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS04020 PTS fructose-like transporter subunit IIB 0.66 PFLU_RS04100 ABC transporter permease subunit low > 109
Pseudomonas fluorescens SBW25 0.53 PFLU_RS04020 PTS fructose-like transporter subunit IIB 0.66 PFLU_RS04100 ABC transporter permease subunit low > 109
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_07325 fructose phosphotransferase system, IIB/IIC components (EC 2.7.1.202) (from data) 0.66 AO356_07260 peptide ABC transporter permease low > 104
Pseudomonas simiae WCS417 0.51 PS417_03975 FruA 0.66 PS417_04060 dipeptide ABC transporter, permease component (from data) low > 88
Pseudomonas putida KT2440 0.49 PP_0795 fructose PTS permease - IIBC component 0.67 PP_0881 dipeptide ABC transporter - putative membrane subunit low > 96
Paraburkholderia graminis OAS925 0.45 ABIE53_004213 PTS system fructose-specific IIC component 0.39 ABIE53_006347 peptide/nickel transport system permease protein low > 113
Azospirillum brasilense Sp245 0.44 AZOBR_RS32335 fructose-specific PTS system (fructose 1-phosphate forming), EII-B'BC components (FruA) (from data) 0.67 AZOBR_RS21765 peptide ABC transporter permease low > 97
Azospirillum sp. SherDot2 0.42 MPMX19_05329 PTS system fructose-specific EIIB'BC component 0.67 MPMX19_04418 Dipeptide transport system permease protein DppB low > 112

Not shown: 9 genomes with orthologs for HER17_RS12855 only; 22 genomes with orthologs for HER17_RS00225 only