Conservation of cofitness between GFF458 and GFF984 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF458 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) 1.0 GFF984 LysR family transcriptional regulator QseA 0.37 18
Escherichia coli BW25113 0.85 b3553 yiaE putative dehydrogenase (VIMSS) 0.83 b4327 yjiE predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECOR27 0.84 NOLOHH_07965 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.83 NOLOHH_03860 hypT hypochlorite stress DNA-binding transcriptional regulator HypT — —
Escherichia fergusonii Becca 0.84 EFB2_00254 Glyoxylate/hydroxypyruvate reductase B 0.82 EFB2_04117 HTH-type transcriptional regulator YjiE low > 86
Escherichia coli BL21 0.84 ECD_03403 glyoxylate/hydroxypyruvate reductase B 0.83 ECD_04196 hypochlorite-responsive transcription factor low > 60
Escherichia coli ECRC62 0.84 BNILDI_03580 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.83 BNILDI_07735 hypT hypochlorite stress DNA-binding transcriptional regulator HypT — —
Escherichia coli ECOR38 0.84 HEPCGN_14910 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.83 HEPCGN_09540 hypT hypochlorite stress DNA-binding transcriptional regulator HypT low > 85
Escherichia coli Nissle 1917 0.84 ECOLIN_RS20330 glyoxylate/hydroxypyruvate reductase GhrB 0.82 ECOLIN_RS24870 hypochlorite stress DNA-binding transcriptional regulator HypT low > 52
Escherichia coli HS(pFamp)R (ATCC 700891) 0.84 OHPLBJKB_00153 Glyoxylate/hydroxypyruvate reductase B 0.83 OHPLBJKB_03739 HTH-type transcriptional regulator YjiE low > 73
Klebsiella michiganensis M5al 0.84 BWI76_RS26960 bifunctional glyoxylate/hydroxypyruvate reductase B 0.41 BWI76_RS17610 LysR family transcriptional regulator low > 92
Dickeya dianthicola ME23 0.68 DZA65_RS00195 glyoxylate/hydroxypyruvate reductase GhrB 0.48 DZA65_RS07765 hypochlorite stress DNA-binding transcriptional regulator HypT low > 75
Dickeya dianthicola 67-19 0.68 HGI48_RS00175 glyoxylate/hydroxypyruvate reductase GhrB 0.48 HGI48_RS07255 hypochlorite stress DNA-binding transcriptional regulator HypT low > 71
Pectobacterium carotovorum WPP14 0.67 HER17_RS21175 glyoxylate/hydroxypyruvate reductase GhrB 0.47 HER17_RS14225 hypochlorite stress DNA-binding transcriptional regulator HypT low > 75
Dickeya dadantii 3937 0.64 DDA3937_RS21080 glyoxylate/hydroxypyruvate reductase GhrB 0.48 DDA3937_RS07390 hypochlorite stress DNA-binding transcriptional regulator HypT low > 74
Pseudomonas sp. RS175 0.56 PFR28_01596 Glyoxylate/hydroxypyruvate reductase B 0.32 PFR28_04497 HTH-type transcriptional regulator YjiE low > 88
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_627 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.32 Pf6N2E2_4084 Transcriptional regulator low > 103
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_24675 bifunctional glyoxylate/hydroxypyruvate reductase B 0.32 AO356_11085 LysR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_26885 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) 0.32 AO353_09945 LysR family transcriptional regulator low > 101
Pseudomonas fluorescens SBW25-INTG 0.54 PFLU_RS13240 D-glycerate dehydrogenase 0.31 PFLU_RS29810 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.54 PFLU_RS13240 D-glycerate dehydrogenase 0.31 PFLU_RS29810 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_4763 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.32 Pf1N1B4_2026 Transcriptional regulator low > 87
Pseudomonas simiae WCS417 0.54 PS417_12555 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) 0.31 PS417_28125 LysR family transcriptional regulator — —
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_2948 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.31 PfGW456L13_743 Transcriptional regulator low > 87
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS07265 D-glycerate dehydrogenase 0.25 QEN71_RS26895 LysR substrate-binding domain-containing protein low > 153
Paraburkholderia graminis OAS925 0.51 ABIE53_002336 gluconate 2-dehydrogenase 0.25 ABIE53_003512 DNA-binding transcriptional LysR family regulator low > 113
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_05213 gluconate 2-dehydrogenase 0.25 H281DRAFT_04272 transcriptional regulator, LysR family — —
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS11290 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) (from data) 0.25 BPHYT_RS16710 LysR family transcriptional regulator low > 109
Pseudomonas putida KT2440 0.48 PP_3376 putative phosphonate dehydrogenase 0.30 PP_5337 LysR family transcriptional regulator low > 96
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_1043 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein 0.31 Psyr_5050 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_1043 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein 0.31 Psyr_5050 transcriptional regulator, LysR family low > 86
Variovorax sp. OAS795 0.42 ABID97_RS20025 D-glycerate dehydrogenase 0.25 ABID97_RS05925 LysR substrate-binding domain-containing protein low > 91
Pseudomonas stutzeri RCH2 0.23 Psest_0431 Lactate dehydrogenase and related dehydrogenases 0.31 Psest_4073 Transcriptional regulator — —
Marinobacter adhaerens HP15 0.20 HP15_2931 glycerate dehydrogenase 0.17 HP15_205 protein containing bacterial regulatory protein, LysR domain low > 73

Not shown: 50 genomes with orthologs for GFF458 only; 2 genomes with orthologs for GFF984 only