Conservation of cofitness between PS417_23370 and PS417_04270 in Pseudomonas simiae WCS417

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23370 protoheme IX farnesyltransferase 1.0 PS417_04270 ribonuclease G 0.37 15
Pseudomonas fluorescens SBW25 0.99 PFLU_RS25200 protoheme IX farnesyltransferase 1.00 PFLU_RS04325 ribonuclease G low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS25200 protoheme IX farnesyltransferase 1.00 PFLU_RS04325 ribonuclease G low > 109
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_4932 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.99 PfGW456L13_5029 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) low > 87
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_15470 protoheme IX farnesyltransferase 0.96 AO353_05230 ribonuclease G 0.38 50
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_969 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.98 Pf1N1B4_1095 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.41 54
Pseudomonas sp. RS175 0.96 PFR28_00246 Protoheme IX farnesyltransferase 0.95 PFR28_00158 Ribonuclease G low > 88
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_16980 protoheme IX farnesyltransferase 0.96 AO356_07110 ribonuclease G low > 104
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_5321 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.95 Pf6N2E2_3283 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.26 26
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_1145 Protoheme IX farnesyltransferase 0.94 Psyr_4159 RNAse G — —
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_1145 Protoheme IX farnesyltransferase 0.94 Psyr_4159 RNAse G — —
Pseudomonas putida KT2440 0.81 PP_0816 protoheme IX farnesyltransferase 0.92 PP_0937 endoribonuclease G (RNAse G) — —
Pantoea sp. MT58 0.72 IAI47_14700 protoheme IX farnesyltransferase 0.55 IAI47_02455 ribonuclease G low > 76
Serratia liquefaciens MT49 0.70 IAI46_04965 protoheme IX farnesyltransferase 0.57 IAI46_22700 ribonuclease G low > 86
Erwinia tracheiphila SCR3 0.70 LU632_RS18395 cyoE heme o synthase 0.56 LU632_RS21430 rng ribonuclease G — —
Pectobacterium carotovorum WPP14 0.70 HER17_RS15895 heme o synthase 0.57 HER17_RS20150 ribonuclease G low > 75
Dickeya dadantii 3937 0.69 DDA3937_RS05595 protoheme IX farnesyltransferase 0.57 DDA3937_RS01450 ribonuclease G low > 74
Dickeya dianthicola ME23 0.69 DZA65_RS05965 protoheme IX farnesyltransferase 0.57 DZA65_RS01430 ribonuclease G low > 75
Dickeya dianthicola 67-19 0.69 HGI48_RS05640 protoheme IX farnesyltransferase 0.57 HGI48_RS01370 ribonuclease G low > 71
Enterobacter sp. TBS_079 0.69 MPMX20_01019 Protoheme IX farnesyltransferase 0.57 MPMX20_04153 Ribonuclease G low > 85
Rahnella sp. WP5 0.69 EX31_RS22200 protoheme IX farnesyltransferase 0.57 EX31_RS12255 ribonuclease G low > 89
Enterobacter asburiae PDN3 0.68 EX28DRAFT_2543 protoheme IX farnesyltransferase 0.57 EX28DRAFT_3297 ribonuclease, Rne/Rng family low > 76
Klebsiella michiganensis M5al 0.68 BWI76_RS06475 protoheme IX farnesyltransferase 0.57 BWI76_RS25480 ribonuclease E/G low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF4342 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.57 GFF2138 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) low > 78
Escherichia coli ECRC99 0.68 KEDOAH_19585 cyoE heme o synthase 0.57 KEDOAH_10405 rng ribonuclease G — —
Escherichia coli Nissle 1917 0.68 ECOLIN_RS02575 heme o synthase 0.57 ECOLIN_RS18605 ribonuclease G low > 52
Escherichia coli ECOR38 0.68 HEPCGN_06995 cyoE heme o synthase 0.57 HEPCGN_16610 rng ribonuclease G low > 85
Escherichia coli ECRC98 0.68 JDDGAC_12035 cyoE heme o synthase 0.57 JDDGAC_21370 rng ribonuclease G — —
Escherichia coli ECOR27 0.68 NOLOHH_01315 cyoE heme o synthase 0.57 NOLOHH_09530 rng ribonuclease G low > 57
Escherichia coli ECRC101 0.68 MCAODC_27605 cyoE heme o synthase 0.57 MCAODC_08265 rng ribonuclease G — —
Escherichia coli BW25113 0.68 b0428 cyoE protoheme IX farnesyltransferase (NCBI) 0.57 b3247 cafA bundles of cytoplasmic filaments (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_03245 Protoheme IX farnesyltransferase 0.57 OHPLBJKB_00458 Ribonuclease G low > 73
Escherichia coli ECRC101 0.68 OKFHMN_08380 cyoE heme o synthase 0.57 OKFHMN_17745 rng ribonuclease G — —
Escherichia fergusonii Becca 0.68 EFB2_03629 Protoheme IX farnesyltransferase 0.57 EFB2_00584 Ribonuclease G low > 86
Escherichia coli BL21 0.68 ECD_00379 protoheme IX farnesyltransferase 0.57 ECD_03106 ribonuclease G low > 60
Escherichia coli ECRC62 0.68 BNILDI_22730 cyoE heme o synthase 0.57 BNILDI_01990 rng ribonuclease G — —
Escherichia coli ECRC102 0.68 NIAGMN_06435 cyoE heme o synthase 0.57 NIAGMN_15505 rng ribonuclease G — —
Shewanella sp. ANA-3 0.60 Shewana3_4035 protoheme IX farnesyltransferase (RefSeq) 0.57 Shewana3_3644 ribonuclease G (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.56 MIT1002_03925 Protoheme IX farnesyltransferase 0.60 MIT1002_00224 Ribonuclease G low > 70
Shewanella loihica PV-4 0.54 Shew_0370 protoheme IX farnesyltransferase (RefSeq) 0.56 Shew_0407 ribonuclease G (RefSeq) low > 60
Acinetobacter radioresistens SK82 0.46 MPMX26_01158 Protoheme IX farnesyltransferase 0.57 MPMX26_00646 Ribonuclease G low > 36

Not shown: 1 genomes with orthologs for PS417_23370 only; 32 genomes with orthologs for PS417_04270 only