Conservation of cofitness between PS417_04020 and PS417_04015 in Pseudomonas simiae WCS417

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04020 glycine/betaine ABC transporter substrate-binding protein 1.0 PS417_04015 choline ABC transporter permease 0.40 3
Pseudomonas fluorescens SBW25-INTG 0.96 PFLU_RS04060 glycine betaine ABC transporter substrate-binding protein 0.98 PFLU_RS04055 ABC transporter permease 0.95 1
Pseudomonas fluorescens SBW25 0.96 PFLU_RS04060 glycine betaine ABC transporter substrate-binding protein 0.98 PFLU_RS04055 ABC transporter permease low > 109
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_5063 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation 0.95 PfGW456L13_5064 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) low > 87
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_05430 glycine/betaine ABC transporter substrate-binding protein 0.96 AO353_05435 choline ABC transporter permease 0.72 2
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_1132 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation 0.97 Pf1N1B4_1133 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) low > 87
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_3331 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation 0.95 Pf6N2E2_3332 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) 0.72 2
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_07295 glycine/betaine ABC transporter substrate-binding protein 0.94 AO356_07300 choline ABC transporter permease 0.48 2
Pseudomonas sp. RS175 0.82 PFR28_00116 Osmoprotectant-binding protein OsmX 0.93 PFR28_00115 Osmoprotectant import permease protein OsmW 0.27 86
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_4251 Substrate-binding region of ABC-type glycine betaine transport system 0.96 Psyr_4250 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_4251 Substrate-binding region of ABC-type glycine betaine transport system 0.96 Psyr_4250 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas putida KT2440 0.70 PP_0870 putative Glycine betaine/carnitine/choline ABC transporter, periplasmic binding protein 0.85 PP_0869 osmoprotectant ABC transporter permease subunit low > 96
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS08535 glycine/betaine ABC transporter substrate-binding protein 0.65 HSERO_RS08540 choline ABC transporter permease — —
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS19710 glycine betaine ABC transporter substrate-binding protein 0.62 QEN71_RS19705 ABC transporter permease low > 153
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS04815 glycine/betaine ABC transporter substrate-binding protein 0.65 RR42_RS04820 choline ABC transporter permease 0.77 1
Pantoea sp. MT58 0.41 IAI47_09775 glycine betaine ABC transporter substrate-binding protein 0.54 IAI47_09770 osmoprotectant ABC transporter permease OsmW low > 76
Enterobacter sp. TBS_079 0.41 MPMX20_02068 Osmoprotectant-binding protein OsmX 0.54 MPMX20_02067 Osmoprotectant import permease protein OsmW low > 85
Enterobacter asburiae PDN3 0.40 EX28DRAFT_1488 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 0.53 EX28DRAFT_1489 ABC-type proline/glycine betaine transport systems, permease component — —
Paraburkholderia graminis OAS925 0.39 ABIE53_001496 osmoprotectant transport system substrate-binding protein 0.52 ABIE53_001493 osmoprotectant transport system permease protein low > 113
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF1780 Putative ABC transporter periplasmic binding protein 0.53 GFF1781 Putative binding-protein-dependent transport system low > 78
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_03487 osmoprotectant transport system substrate-binding protein 0.53 H281DRAFT_03484 osmoprotectant transport system permease protein low > 103
Sinorhizobium meliloti 1021 0.36 SMa1462 ABC transporter 0.50 SMa1467 inner-membrane permease low > 103
Erwinia tracheiphila SCR3 0.32 LU632_RS12285 glycine/betaine ABC transporter substrate-binding protein 0.47 LU632_RS12290 osmW ABC transporter permease subunit low > 74
Bosea sp. OAE506 0.21 ABIE41_RS21060 glycine betaine ABC transporter substrate-binding protein 0.31 ABIE41_RS21070 ABC transporter permease low > 77

Not shown: 22 genomes with orthologs for PS417_04020 only; 1 genomes with orthologs for PS417_04015 only