Conservation of cofitness between GFF3650 and GFF601 in Sphingobium sp. HT1-2

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF3650 Alanine dehydrogenase (EC 1.4.1.1) 1.0 GFF601 Membrane protein insertion efficiency factor YidD low > 95
Paraburkholderia graminis OAS925 0.65 ABIE53_005197 alanine dehydrogenase 0.44 ABIE53_000335 putative membrane protein insertion efficiency factor low > 113
Kangiella aquimarina DSM 16071 0.62 B158DRAFT_1823 alanine dehydrogenase 0.55 B158DRAFT_0371 conserved hypothetical protein YidD — —
Sphingomonas koreensis DSMZ 15582 0.61 Ga0059261_3899 Alanine dehydrogenase (EC 1.4.1.1) (from data) 0.82 Ga0059261_0790 putative membrane protein insertion efficiency factor low > 68
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS01395 Alanine dehydrogenase (EC 1.4.1.1) (from data) 0.39 ABZR86_RS08755 membrane protein insertion efficiency factor YidD low > 74
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS20785 alanine dehydrogenase 0.43 QEN71_RS29670 membrane protein insertion efficiency factor YidD low > 153
Dinoroseobacter shibae DFL-12 0.55 Dshi_0244 alanine dehydrogenase (RefSeq) 0.54 Dshi_0331 protein of unknown function DUF37 (RefSeq) low > 64
Phocaeicola dorei CL03T12C01 0.54 ABI39_RS18840 alanine dehydrogenase 0.59 ABI39_RS05530 membrane protein insertion efficiency factor YidD low > 72
Phocaeicola vulgatus CL09T03C04 0.54 HMPREF1058_RS05025 alanine dehydrogenase 0.59 HMPREF1058_RS11395 membrane protein insertion efficiency factor YidD — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.54 Echvi_0201 alanine dehydrogenase 0.55 Echvi_2310 conserved hypothetical protein YidD low > 79
Cellulophaga baltica 18 0.53 M666_RS03035 alanine dehydrogenase 0.61 M666_RS00380 membrane protein insertion efficiency factor YidD low > 67
Caulobacter crescentus NA1000 0.52 CCNA_03689 alanine dehydrogenase 0.52 CCNA_00495 putative membrane protein insertion efficiency factor YidD low > 66
Caulobacter crescentus NA1000 Δfur 0.52 CCNA_03689 alanine dehydrogenase 0.52 CCNA_00495 putative membrane protein insertion efficiency factor YidD low > 67
Desulfovibrio vulgaris Hildenborough JW710 0.51 DVU0571 ald alanine dehydrogenase (TIGR) 0.55 DVU1076 conserved hypothetical protein TIGR00278 (TIGR) low > 55
Bacteroides stercoris CC31F 0.50 HMPREF1181_RS10690 alanine dehydrogenase 0.55 HMPREF1181_RS01650 membrane protein insertion efficiency factor YidD low > 56
Dechlorosoma suillum PS 0.48 Dsui_2126 alanine dehydrogenase 0.53 Dsui_0835 conserved hypothetical protein YidD low > 51
Synechococcus elongatus PCC 7942 0.43 Synpcc7942_1760 ald L-alanine dehydrogenase 0.47 Synpcc7942_1486 Protein of unknown function DUF37 low > 38
Synechocystis sp000284455 PCC 6803 0.42 SGL_RS02960 alanine dehydrogenase 0.47 SGL_RS14705 membrane protein insertion efficiency factor YidD — —
Lysobacter sp. OAE881 0.35 ABIE51_RS11460 alanine dehydrogenase 0.57 ABIE51_RS13455 membrane protein insertion efficiency factor YidD low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.31 ABZR88_RS19890 alanine dehydrogenase 0.60 ABZR88_RS00685 membrane protein insertion efficiency factor YidD low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.29 CA265_RS21515 alanine dehydrogenase 0.53 CA265_RS10955 membrane protein insertion efficiency factor YidD low > 88
Parabacteroides merdae CL09T00C40 0.26 HMPREF1078_RS07210 alanine dehydrogenase 0.60 HMPREF1078_RS06755 membrane protein insertion efficiency factor YidD low > 61

Not shown: 28 genomes with orthologs for GFF3650 only; 25 genomes with orthologs for GFF601 only