Conservation of cofitness between GFF4045 and GFF589 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4045 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) 1.0 GFF589 GlpG protein (membrane protein of glp regulon) 0.51 15
Escherichia coli HS(pFamp)R (ATCC 700891) 0.88 OHPLBJKB_03448 hypothetical protein 0.91 OHPLBJKB_00280 Rhomboid protease GlpG low > 73
Escherichia coli ECRC62 0.88 BNILDI_09350 yafS Uncharacterized protein YafS 0.92 BNILDI_02785 glpG rhomboid family intramembrane serine protease GlpG low > 75
Escherichia coli ECOR38 0.88 HEPCGN_07915 yafS Uncharacterized protein YafS 0.91 HEPCGN_15755 glpG rhomboid family intramembrane serine protease GlpG low > 87
Escherichia coli Nissle 1917 0.88 ECOLIN_RS01165 class I SAM-dependent methyltransferase 0.91 ECOLIN_RS26040 rhomboid family intramembrane serine protease GlpG — —
Escherichia fergusonii Becca 0.88 EFB2_03830 hypothetical protein 0.91 EFB2_00405 Rhomboid protease GlpG low > 86
Escherichia coli BW25113 0.88 b0213 yafS orf, hypothetical protein (VIMSS) 0.91 b3424 glpG predicted intramembrane serine protease (NCBI) low > 76
Escherichia coli ECRC98 0.87 JDDGAC_13570 yafS Uncharacterized protein YafS 0.91 JDDGAC_20565 glpG rhomboid family intramembrane serine protease GlpG low > 86
Escherichia coli ECRC101 0.87 MCAODC_00490 yafS Uncharacterized protein YafS 0.91 MCAODC_07465 glpG rhomboid family intramembrane serine protease GlpG low > 87
Escherichia coli ECRC102 0.87 NIAGMN_07825 yafS Uncharacterized protein YafS 0.91 NIAGMN_14705 glpG rhomboid family intramembrane serine protease GlpG — —
Escherichia coli ECOR27 0.87 NOLOHH_02320 yafS Uncharacterized protein YafS 0.91 NOLOHH_08730 glpG rhomboid family intramembrane serine protease GlpG low > 75
Escherichia coli ECRC100 0.87 OKFHMN_09975 yafS Uncharacterized protein YafS 0.91 OKFHMN_16935 glpG rhomboid family intramembrane serine protease GlpG low > 80
Enterobacter asburiae PDN3 0.87 EX28DRAFT_2681 Methyltransferase domain 0.87 EX28DRAFT_4122 rhomboid family protease GlpG low > 76
Escherichia coli ECRC99 0.87 KEDOAH_18180 yafS Uncharacterized protein YafS 0.91 KEDOAH_11205 glpG rhomboid family intramembrane serine protease GlpG — —
Escherichia coli BL21 0.87 ECD_00206 putative S-adenosyl-L-methionine-dependent methyltransferase 0.91 ECD_03275 rhomboid intramembrane serine protease low > 61
Enterobacter sp. TBS_079 0.85 MPMX20_00898 hypothetical protein 0.86 MPMX20_04307 Rhomboid protease GlpG low > 85
Klebsiella michiganensis M5al 0.81 BWI76_RS05445 type 11 methyltransferase 0.86 BWI76_RS26180 rhomboid family intramembrane serine protease GlpG low > 92
Serratia liquefaciens MT49 0.69 IAI46_04140 class I SAM-dependent methyltransferase 0.57 IAI46_23905 rhomboid family intramembrane serine protease GlpG low > 86
Pantoea sp. MT58 0.68 IAI47_15335 class I SAM-dependent methyltransferase 0.65 IAI47_01760 rhomboid family intramembrane serine protease GlpG low > 76
Rahnella sp. WP5 0.67 EX31_RS21195 class I SAM-dependent methyltransferase 0.47 EX31_RS04990 rhomboid family intramembrane serine protease GlpG low > 89
Erwinia tracheiphila SCR3 0.63 LU632_RS01085 class I SAM-dependent methyltransferase 0.63 LU632_RS23010 glpG rhomboid family intramembrane serine protease GlpG low > 74
Pectobacterium carotovorum WPP14 0.60 HER17_RS05460 class I SAM-dependent methyltransferase 0.57 HER17_RS01525 rhomboid family intramembrane serine protease GlpG low > 75
Dickeya dadantii 3937 0.58 DDA3937_RS16055 class I SAM-dependent methyltransferase 0.52 DDA3937_RS19675 rhomboid family intramembrane serine protease GlpG low > 74
Dickeya dianthicola 67-19 0.58 HGI48_RS16175 methyltransferase domain-containing protein 0.53 HGI48_RS19805 rhomboid family intramembrane serine protease GlpG low > 71
Dickeya dianthicola ME23 0.58 DZA65_RS17260 class I SAM-dependent methyltransferase 0.52 DZA65_RS20895 rhomboid family intramembrane serine protease GlpG low > 75
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_11390 class I SAM-dependent methyltransferase 0.37 CSW01_00530 rhomboid family intramembrane serine protease GlpG low > 62
Shewanella amazonensis SB2B 0.32 Sama_1883 hypothetical protein (RefSeq) 0.36 Sama_0095 glpG protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.29 Shewana3_2368 methyltransferase type 11 (RefSeq) 0.39 Shewana3_4107 rhomboid family protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.29 SO2562 conserved hypothetical protein (NCBI ptt file) 0.38 SO4671 glpG glpG protein (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.28 MIT1002_02493 Methyltransferase domain protein 0.26 MIT1002_00066 Rhomboid protease GlpG low > 70
Shewanella loihica PV-4 0.24 Shew_2113 hypothetical protein (RefSeq) 0.39 Shew_3712 rhomboid family protein (RefSeq) — —
Pseudomonas sp. RS175 0.15 PFR28_01553 hypothetical protein 0.17 PFR28_01571 Rhomboid protease GlpG low > 88
Pseudomonas fluorescens FW300-N2E2 0.15 Pf6N2E2_588 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) 0.18 Pf6N2E2_601 GlpG protein (membrane protein of glp regulon) — —
Pseudomonas fluorescens FW300-N2C3 0.15 AO356_24485 SAM-dependent methyltransferase 0.16 AO356_24545 peptidase S54 low > 104
Pseudomonas fluorescens GW456-L13 0.15 PfGW456L13_3339 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) 0.16 PfGW456L13_3328 GlpG protein (membrane protein of glp regulon) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.14 Psyr_1762 conserved hypothetical protein 0.16 Psyr_1687 Rhomboid-like protein low > 86
Pseudomonas syringae pv. syringae B728a 0.14 Psyr_1762 conserved hypothetical protein 0.16 Psyr_1687 Rhomboid-like protein low > 86

Not shown: 10 genomes with orthologs for GFF4045 only; 4 genomes with orthologs for GFF589 only